Your message dated Mon, 08 Dec 2025 18:51:23 +0000
with message-id <[email protected]>
and subject line Bug#1114419: fixed in trnascan-se 2.0.12+ds-2
has caused the Debian Bug report #1114419,
regarding trnascan-se: FTBFS: src/gnuregex.c:1175:20: error: too many arguments 
to function 'at_begline_loc_p'; expected 0, have 3
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
1114419: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1114419
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:trnascan-se
Version: 2.0.12+ds-1
Severity: serious
Tags: ftbfs forky sid

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build.

Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202509/

About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:trnascan-se, so that this is still
visible in the BTS web page for this package.

Thanks.

--------------------------------------------------------------------------------
[...]
 debian/rules clean
dh clean --no-parallel
   dh_autoreconf_clean -O--no-parallel
   dh_clean -O--no-parallel
 debian/rules binary
dh binary --no-parallel
   dh_update_autotools_config -O--no-parallel
   dh_autoreconf -O--no-parallel
configure.ac:21: installing './compile'
configure.ac:51: installing './config.guess'
configure.ac:51: installing './config.sub'
configure.ac:31: installing './install-sh'
configure.ac:56: installing './missing'
Makefile.am: installing './depcomp'
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- --enable-debugging
        ./configure --build=x86_64-linux-gnu --prefix=/usr 
--includedir=\${prefix}/include --mandir=\${prefix}/share/man 
--infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var 
--disable-option-checking --disable-silent-rules 
--libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run 
--disable-maintainer-mode --disable-dependency-tracking --enable-debugging
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking for perl... /usr/bin/perl
checking for Perl version 5.0.0 or later... yes

checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for size_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for limits.h... yes
checking for memory.h... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for unistd.h... (cached) yes
checking for _Bool... yes
checking for stdbool.h that conforms to C99 or later... yes
checking for size_t... (cached) yes
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for GNU libc compatible malloc... yes
checking for GNU libc compatible realloc... yes
checking for bzero... yes
checking for memset... yes
checking for re_comp... yes
checking for regcomp... yes
checking for sqrt... no
checking for strcasecmp... yes
checking for strchr... yes
checking for strstr... yes
checking whether sleep supports fractional seconds... yes
checking filesystem timestamp resolution... 0.01
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking xargs -n works... yes
checking dependency style of gcc... none
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
config.status: executing depfiles commands
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_build -O--no-parallel
        make -j1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make  all-am
make[2]: Entering directory '/<<PKGBUILDDIR>>'
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/alignio.o src/alignio.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/sqerror.o src/sqerror.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/sqio.o src/sqio.c
src/sqio.c: In function ‘SeqfileFormat’:
src/sqio.c:1030:11: warning: the comparison will always evaluate as ‘false’ 
for the address of ‘sp’ will never be NULL [-Waddress]
 1030 |     if (sp==NULL || *sp=='\0')
      |           ^~
src/sqio.c:1013:9: note: ‘sp’ declared here
 1013 |   char  sp[LINEBUFLEN];
      |         ^~
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/iupac.o src/iupac.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/msf.o src/msf.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/revcomp.o src/revcomp.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/selex.o src/selex.c
src/selex.c: In function ‘ReadSELEX’:
src/selex.c:218:30: warning: ‘num’ may be used uninitialized 
[-Wmaybe-uninitialized]
  218 |   if ((aseqs     = (char **) malloc (num * sizeof(char *))) == NULL)
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/selex.c:68:12: note: ‘num’ was declared here
   68 |   int      num;                 /* number of seqs read          */
      |            ^~~
src/selex.c:74:6: warning: ‘blocks’ may be used uninitialized 
[-Wmaybe-uninitialized]
   74 |   } *blocks;
      |      ^~~~~~
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/sre_ctype.o 
src/sre_ctype.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/sre_math.o 
src/sre_math.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/sre_string.o 
src/sre_string.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/stack.o src/stack.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/types.o src/types.c
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2 -O -g -O2 
-Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. 
-fstack-protector-strong -fstack-clash-protection -Wformat 
-Werror=format-security -fcf-protection -Wall -c -o src/gnuregex.o 
src/gnuregex.c
src/gnuregex.c: In function ‘re_set_syntax’:
src/gnuregex.c:795:1: warning: old-style function definition 
[-Wold-style-definition]
  795 | re_set_syntax (syntax)
      | ^~~~~~~~~~~~~
src/gnuregex.c: In function ‘regex_compile’:
src/gnuregex.c:1049:1: warning: old-style function definition 
[-Wold-style-definition]
 1049 | regex_compile (pattern, size, syntax, bufp)
      | ^~~~~~~~~~~~~
src/gnuregex.c:1175:20: error: too many arguments to function 
‘at_begline_loc_p’; expected 0, have 3
 1175 |                 || at_begline_loc_p (pattern, p, syntax))
      |                    ^~~~~~~~~~~~~~~~  ~~~~~~~
src/gnuregex.c:831:16: note: declared here
  831 | static boolean at_begline_loc_p (), at_endline_loc_p ();
      |                ^~~~~~~~~~~~~~~~
src/gnuregex.c:1190:20: error: too many arguments to function 
‘at_endline_loc_p’; expected 0, have 3
 1190 |                 || at_endline_loc_p (p, pend, syntax))
      |                    ^~~~~~~~~~~~~~~~  ~
src/gnuregex.c:831:37: note: declared here
  831 | static boolean at_begline_loc_p (), at_endline_loc_p ();
      |                                     ^~~~~~~~~~~~~~~~
src/gnuregex.c:903:3: error: too many arguments to function ‘store_op1’; 
expected 0, have 3
  903 |   store_op1 (op, loc, (to) - (loc) - 3)
      |   ^~~~~~~~~
src/gnuregex.c:1296:21: note: in expansion of macro ‘STORE_JUMP’
 1296 |                     STORE_JUMP (jump, b, laststart);
      |                     ^~~~~~~~~~
src/gnuregex.c:829:13: note: declared here
  829 | static void store_op1 (), store_op2 ();
      |             ^~~~~~~~~
src/gnuregex.c:903:3: error: too many arguments to function ‘store_op1’; 
expected 0, have 3
  903 |   store_op1 (op, loc, (to) - (loc) - 3)
      |   ^~~~~~~~~
src/gnuregex.c:1301:19: note: in expansion of macro ‘STORE_JUMP’
 1301 |                   STORE_JUMP (maybe_pop_jump, b, laststart - 3);
      |                   ^~~~~~~~~~
src/gnuregex.c:829:13: note: declared here
  829 | static void store_op1 (), store_op2 ();
      |             ^~~~~~~~~
src/gnuregex.c:911:3: error: too many arguments to function ‘insert_op1’; 
expected 0, have 4
  911 |   insert_op1 (op, loc, (to) - (loc) - 3, b)
      |   ^~~~~~~~~~
src/gnuregex.c:1310:13: note: in expansion of macro ‘INSERT_JUMP’
 1310 |             INSERT_JUMP (keep_string_p ? on_failure_keep_string_jump
      |             ^~~~~~~~~~~
src/gnuregex.c:830:13: note: declared here
  830 | static void insert_op1 (), insert_op2 ();
      |             ^~~~~~~~~~
src/gnuregex.c:911:3: error: too many arguments to function ‘insert_op1’; 
expected 0, have 4
  911 |   insert_op1 (op, loc, (to) - (loc) - 3, b)
      |   ^~~~~~~~~~
src/gnuregex.c:1324:17: note: in expansion of macro ‘INSERT_JUMP’
 1324 |                 INSERT_JUMP (dummy_failure_jump, laststart, laststart + 
6);
      |                 ^~~~~~~~~~~
src/gnuregex.c:830:13: note: declared here
  830 | static void insert_op1 (), insert_op2 ();
      |             ^~~~~~~~~~
src/gnuregex.c:1407:25: error: too many arguments to function 
‘compile_range’; expected 0, have 5
 1407 |                       = compile_range (&p, pend, translate, syntax, b);
      |                         ^~~~~~~~~~~~~  ~~
src/gnuregex.c:833:22: note: declared here
  833 | static reg_errcode_t compile_range ();
      |                      ^~~~~~~~~~~~~
src/gnuregex.c:1418:27: error: too many arguments to function 
‘compile_range’; expected 0, have 5
 1418 |                     ret = compile_range (&p, pend, translate, syntax, 
b);
      |                           ^~~~~~~~~~~~~  ~~
src/gnuregex.c:833:22: note: declared here
  833 | static reg_errcode_t compile_range ();
      |                      ^~~~~~~~~~~~~
src/gnuregex.c:903:3: error: too many arguments to function ‘store_op1’; 
expected 0, have 3
  903 |   store_op1 (op, loc, (to) - (loc) - 3)
      |   ^~~~~~~~~
src/gnuregex.c:1631:19: note: in expansion of macro ‘STORE_JUMP’
 1631 |                   STORE_JUMP (jump_past_alt, fixup_alt_jump, b - 1);
      |                   ^~~~~~~~~~
src/gnuregex.c:829:13: note: declared here
  829 | static void store_op1 (), store_op2 ();
      |             ^~~~~~~~~
src/gnuregex.c:911:3: error: too many arguments to function ‘insert_op1’; 
expected 0, have 4
  911 |   insert_op1 (op, loc, (to) - (loc) - 3, b)
      |   ^~~~~~~~~~
src/gnuregex.c:1690:15: note: in expansion of macro ‘INSERT_JUMP’
 1690 |               INSERT_JUMP (on_failure_jump, begalt, b + 6);
      |               ^~~~~~~~~~~
src/gnuregex.c:830:13: note: declared here
  830 | static void insert_op1 (), insert_op2 ();
      |             ^~~~~~~~~~
src/gnuregex.c:903:3: error: too many arguments to function ‘store_op1’; 
expected 0, have 3
  903 |   store_op1 (op, loc, (to) - (loc) - 3)
      |   ^~~~~~~~~
src/gnuregex.c:1711:17: note: in expansion of macro ‘STORE_JUMP’
 1711 |                 STORE_JUMP (jump_past_alt, fixup_alt_jump, b);
      |                 ^~~~~~~~~~
src/gnuregex.c:829:13: note: declared here
  829 | static void store_op1 (), store_op2 ();
      |             ^~~~~~~~~
src/gnuregex.c:911:3: error: too many arguments to function ‘insert_op1’; 
expected 0, have 4
  911 |   insert_op1 (op, loc, (to) - (loc) - 3, b)
      |   ^~~~~~~~~~
src/gnuregex.c:1805:22: note: in expansion of macro ‘INSERT_JUMP’
 1805 |                      INSERT_JUMP (jump, laststart, b + 3);
      |                      ^~~~~~~~~~~
src/gnuregex.c:830:13: note: declared here
  830 | static void insert_op1 (), insert_op2 ();
      |             ^~~~~~~~~~
src/gnuregex.c:915:3: error: too many arguments to function ‘insert_op2’; 
expected 0, have 5
  915 |   insert_op2 (op, loc, (to) - (loc) - 3, arg, b)
      |   ^~~~~~~~~~
src/gnuregex.c:1830:22: note: in expansion of macro ‘INSERT_JUMP2’
 1830 |                      INSERT_JUMP2 (succeed_n, laststart,
      |                      ^~~~~~~~~~~~
src/gnuregex.c:830:28: note: declared here
  830 | static void insert_op1 (), insert_op2 ();
      |                            ^~~~~~~~~~
src/gnuregex.c:1839:22: error: too many arguments to function ‘insert_op2’; 
expected 0, have 5
 1839 |                      insert_op2 (set_number_at, laststart, 5, 
lower_bound, b);
      |                      ^~~~~~~~~~  ~~~~~~~~~~~~~
src/gnuregex.c:830:28: note: declared here
  830 | static void insert_op1 (), insert_op2 ();
      |                            ^~~~~~~~~~
src/gnuregex.c:907:3: error: too many arguments to function ‘store_op2’; 
expected 0, have 4
  907 |   store_op2 (op, loc, (to) - (loc) - 3, arg)
      |   ^~~~~~~~~
src/gnuregex.c:1850:26: note: in expansion of macro ‘STORE_JUMP2’
 1850 |                          STORE_JUMP2 (jump_n, b, laststart + 5,
      |                          ^~~~~~~~~~~
src/gnuregex.c:829:27: note: declared here
  829 | static void store_op1 (), store_op2 ();
      |                           ^~~~~~~~~
src/gnuregex.c:1868:26: error: too many arguments to function ‘insert_op2’; 
expected 0, have 5
 1868 |                          insert_op2 (set_number_at, laststart, b - 
laststart,
      |                          ^~~~~~~~~~  ~~~~~~~~~~~~~
src/gnuregex.c:830:28: note: declared here
  830 | static void insert_op1 (), insert_op2 ();
      |                            ^~~~~~~~~~
src/gnuregex.c:1962:19: error: too many arguments to function 
‘group_in_compile_stack’; expected 0, have 2
 1962 |               if (group_in_compile_stack (compile_stack, c1))
      |                   ^~~~~~~~~~~~~~~~~~~~~~  ~~~~~~~~~~~~~
src/gnuregex.c:832:16: note: declared here
  832 | static boolean group_in_compile_stack ();
      |                ^~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c:903:3: error: too many arguments to function ‘store_op1’; 
expected 0, have 3
  903 |   store_op1 (op, loc, (to) - (loc) - 3)
      |   ^~~~~~~~~
src/gnuregex.c:2028:5: note: in expansion of macro ‘STORE_JUMP’
 2028 |     STORE_JUMP (jump_past_alt, fixup_alt_jump, b);
      |     ^~~~~~~~~~
src/gnuregex.c:829:13: note: declared here
  829 | static void store_op1 (), store_op2 ();
      |             ^~~~~~~~~
src/gnuregex.c: In function ‘store_op1’:
src/gnuregex.c:2054:1: warning: old-style function definition 
[-Wold-style-definition]
 2054 | store_op1 (op, loc, arg)
      | ^~~~~~~~~
src/gnuregex.c: In function ‘store_op2’:
src/gnuregex.c:2067:1: warning: old-style function definition 
[-Wold-style-definition]
 2067 | store_op2 (op, loc, arg1, arg2)
      | ^~~~~~~~~
src/gnuregex.c: In function ‘insert_op1’:
src/gnuregex.c:2082:1: warning: old-style function definition 
[-Wold-style-definition]
 2082 | insert_op1 (op, loc, arg, end)
      | ^~~~~~~~~~
src/gnuregex.c:2094:3: error: too many arguments to function ‘store_op1’; 
expected 0, have 3
 2094 |   store_op1 (op, loc, arg);
      |   ^~~~~~~~~  ~~
src/gnuregex.c:2054:1: note: declared here
 2054 | store_op1 (op, loc, arg)
      | ^~~~~~~~~
src/gnuregex.c: In function ‘insert_op2’:
src/gnuregex.c:2101:1: warning: old-style function definition 
[-Wold-style-definition]
 2101 | insert_op2 (op, loc, arg1, arg2, end)
      | ^~~~~~~~~~
src/gnuregex.c:2113:3: error: too many arguments to function ‘store_op2’; 
expected 0, have 4
 2113 |   store_op2 (op, loc, arg1, arg2);
      |   ^~~~~~~~~  ~~
src/gnuregex.c:2067:1: note: declared here
 2067 | store_op2 (op, loc, arg1, arg2)
      | ^~~~~~~~~
src/gnuregex.c: In function ‘at_begline_loc_p’:
src/gnuregex.c:2122:1: warning: old-style function definition 
[-Wold-style-definition]
 2122 | at_begline_loc_p (pattern, p, syntax)
      | ^~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘at_endline_loc_p’:
src/gnuregex.c:2141:1: warning: old-style function definition 
[-Wold-style-definition]
 2141 | at_endline_loc_p (p, pend, syntax)
      | ^~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘group_in_compile_stack’:
src/gnuregex.c:2163:1: warning: old-style function definition 
[-Wold-style-definition]
 2163 | group_in_compile_stack (compile_stack, regnum)
      | ^~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘compile_range’:
src/gnuregex.c:2191:1: warning: old-style function definition 
[-Wold-style-definition]
 2191 | compile_range (p_ptr, pend, translate, syntax, b)
      | ^~~~~~~~~~~~~
src/gnuregex.c: In function ‘re_compile_fastmap’:
src/gnuregex.c:2523:1: warning: old-style function definition 
[-Wold-style-definition]
 2523 | re_compile_fastmap (bufp)
      | ^~~~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘re_set_registers’:
src/gnuregex.c:2808:1: warning: old-style function definition 
[-Wold-style-definition]
 2808 | re_set_registers (bufp, regs, num_regs, starts, ends)
      | ^~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘re_search’:
src/gnuregex.c:2835:1: warning: old-style function definition 
[-Wold-style-definition]
 2835 | re_search (bufp, string, size, startpos, range, regs)
      | ^~~~~~~~~
src/gnuregex.c: In function ‘re_search_2’:
src/gnuregex.c:2868:1: warning: old-style function definition 
[-Wold-style-definition]
 2868 | re_search_2 (bufp, string1, size1, string2, size2, startpos, range, 
regs, stop)
      | ^~~~~~~~~~~
src/gnuregex.c: In function ‘re_match’:
src/gnuregex.c:3127:1: warning: old-style function definition 
[-Wold-style-definition]
 3127 | re_match (bufp, string, size, pos, regs)
      | ^~~~~~~~
src/gnuregex.c: In function ‘re_match_2’:
src/gnuregex.c:3152:1: warning: old-style function definition 
[-Wold-style-definition]
 3152 | re_match_2 (bufp, string1, size1, string2, size2, pos, regs, stop)
      | ^~~~~~~~~~
src/gnuregex.c:3608:17: error: too many arguments to function 
‘group_match_null_string_p’; expected 0, have 3
 3608 |               = group_match_null_string_p (&p1, pend, reg_info);
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~  ~~~
src/gnuregex.c:2988:16: note: declared here
 2988 |                group_match_null_string_p ();
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c:2345:11: warning: unused variable ‘destination’ 
[-Wunused-variable]
 2345 |     char *destination;                                                  
\
      |           ^~~~~~~~~~~
src/gnuregex.c:3762:19: note: in expansion of macro ‘PUSH_FAILURE_POINT’
 3762 |                   PUSH_FAILURE_POINT (p1 + mcnt, d, -2);
      |                   ^~~~~~~~~~~~~~~~~~
src/gnuregex.c:3826:23: error: too many arguments to function 
‘bcmp_translate’; expected 0, have 4
 3826 |                     ? bcmp_translate (d, d2, mcnt, translate)
      |                       ^~~~~~~~~~~~~~  ~
src/gnuregex.c:2985:12: note: declared here
 2985 | static int bcmp_translate ();
      |            ^~~~~~~~~~~~~~
src/gnuregex.c:2345:11: warning: unused variable ‘destination’ 
[-Wunused-variable]
 2345 |     char *destination;                                                  
\
      |           ^~~~~~~~~~~
src/gnuregex.c:3909:11: note: in expansion of macro ‘PUSH_FAILURE_POINT’
 3909 |           PUSH_FAILURE_POINT (p + mcnt, NULL, -2);
      |           ^~~~~~~~~~~~~~~~~~
src/gnuregex.c:2345:11: warning: unused variable ‘destination’ 
[-Wunused-variable]
 2345 |     char *destination;                                                  
\
      |           ^~~~~~~~~~~
src/gnuregex.c:3962:11: note: in expansion of macro ‘PUSH_FAILURE_POINT’
 3962 |           PUSH_FAILURE_POINT (p + mcnt, d, -2);
      |           ^~~~~~~~~~~~~~~~~~
src/gnuregex.c:4065:19: warning: variable ‘sdummy’ set but not used 
[-Wunused-but-set-variable]
 4065 |             char *sdummy;
      |                   ^~~~~~
src/gnuregex.c:4064:28: warning: variable ‘pdummy’ set but not used 
[-Wunused-but-set-variable]
 4064 |             unsigned char *pdummy;
      |                            ^~~~~~
src/gnuregex.c:2345:11: warning: unused variable ‘destination’ 
[-Wunused-variable]
 2345 |     char *destination;                                                  
\
      |           ^~~~~~~~~~~
src/gnuregex.c:4101:11: note: in expansion of macro ‘PUSH_FAILURE_POINT’
 4101 |           PUSH_FAILURE_POINT (0, 0, -2);
      |           ^~~~~~~~~~~~~~~~~~
src/gnuregex.c:2345:11: warning: unused variable ‘destination’ 
[-Wunused-variable]
 2345 |     char *destination;                                                  
\
      |           ^~~~~~~~~~~
src/gnuregex.c:4114:11: note: in expansion of macro ‘PUSH_FAILURE_POINT’
 4114 |           PUSH_FAILURE_POINT (0, 0, -2);
      |           ^~~~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘group_match_null_string_p’:
src/gnuregex.c:4348:1: warning: old-style function definition 
[-Wold-style-definition]
 4348 | group_match_null_string_p (p, end, reg_info)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c:4398:24: error: too many arguments to function 
‘alt_match_null_string_p’; expected 0, have 3
 4398 |                   if (!alt_match_null_string_p (p1, p1 + mcnt - 3,
      |                        ^~~~~~~~~~~~~~~~~~~~~~~  ~~
src/gnuregex.c:2986:16: note: declared here
 2986 | static boolean alt_match_null_string_p (),
      |                ^~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c:4428:20: error: too many arguments to function 
‘alt_match_null_string_p’; expected 0, have 3
 4428 |               if (!alt_match_null_string_p (p1, p1 + mcnt, reg_info))
      |                    ^~~~~~~~~~~~~~~~~~~~~~~  ~~
src/gnuregex.c:2986:16: note: declared here
 2986 | static boolean alt_match_null_string_p (),
      |                ^~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c:4443:16: error: too many arguments to function 
‘common_op_match_null_string_p’; expected 0, have 3
 4443 |           if (!common_op_match_null_string_p (&p1, end, reg_info))
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~
src/gnuregex.c:2987:16: note: declared here
 2987 |                common_op_match_null_string_p (),
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘alt_match_null_string_p’:
src/gnuregex.c:4457:1: warning: old-style function definition 
[-Wold-style-definition]
 4457 | alt_match_null_string_p (p, end, reg_info)
      | ^~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c:4479:16: error: too many arguments to function 
‘common_op_match_null_string_p’; expected 0, have 3
 4479 |           if (!common_op_match_null_string_p (&p1, end, reg_info))
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~
src/gnuregex.c:2987:16: note: declared here
 2987 |                common_op_match_null_string_p (),
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘common_op_match_null_string_p’:
src/gnuregex.c:4494:1: warning: old-style function definition 
[-Wold-style-definition]
 4494 | common_op_match_null_string_p (p, end, reg_info)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c:4524:13: error: too many arguments to function 
‘group_match_null_string_p’; expected 0, have 3
 4524 |       ret = group_match_null_string_p (&p1, end, reg_info);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~  ~~~
src/gnuregex.c:4348:1: note: declared here
 4348 | group_match_null_string_p (p, end, reg_info)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~
src/gnuregex.c: In function ‘bcmp_translate’:
src/gnuregex.c:4582:1: warning: old-style function definition 
[-Wold-style-definition]
 4582 | bcmp_translate (s1, s2, len, translate)
      | ^~~~~~~~~~~~~~
src/gnuregex.c: In function ‘regcomp’:
src/gnuregex.c:4724:1: warning: old-style function definition 
[-Wold-style-definition]
 4724 | regcomp (preg, pattern, cflags)
      | ^~~~~~~
src/gnuregex.c: In function ‘regexec’:
src/gnuregex.c:4799:1: warning: old-style function definition 
[-Wold-style-definition]
 4799 | regexec (preg, string, nmatch, pmatch, eflags)
      | ^~~~~~~
src/gnuregex.c: In function ‘regerror’:
src/gnuregex.c:4864:1: warning: old-style function definition 
[-Wold-style-definition]
 4864 | regerror (errcode, preg, errbuf, errbuf_size)
      | ^~~~~~~~
src/gnuregex.c: In function ‘regfree’:
src/gnuregex.c:4908:1: warning: old-style function definition 
[-Wold-style-definition]
 4908 | regfree (preg)
      | ^~~~~~~
make[2]: *** [Makefile:704: src/gnuregex.o] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: *** [Makefile:423: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j1 returned exit code 2
make: *** [debian/rules:6: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------

--- End Message ---
--- Begin Message ---
Source: trnascan-se
Source-Version: 2.0.12+ds-2
Done: Andreas Tille <[email protected]>

We believe that the bug you reported is fixed in the latest version of
trnascan-se, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated trnascan-se package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Mon, 08 Dec 2025 19:05:06 +0100
Source: trnascan-se
Binary: trnascan-se trnascan-se-common trnascan-se-dbgsym
Architecture: source all amd64
Version: 2.0.12+ds-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
 trnascan-se - detection of transfer RNA genes in genomic sequence
 trnascan-se-common - detection of transfer RNA genes in genomic sequence 
(common files
Closes: 1114419
Changes:
 trnascan-se (2.0.12+ds-2) unstable; urgency=medium
 .
   * Team upload.
   * d/rules: force std=gnu11
     Closes: #1114419
   * d/watch: version=5
   * Standards-Version: 4.7.2 (routine-update)
   * Use secure URI in Homepage field.
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Files:
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trnascan-se_2.0.12+ds-2.dsc
 0f0544d25caa5fa06b4e0a62807dda8c 11448 non-free/science optional 
trnascan-se_2.0.12+ds-2.debian.tar.xz
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trnascan-se-common_2.0.12+ds-2_all.deb
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trnascan-se-dbgsym_2.0.12+ds-2_amd64.deb
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trnascan-se_2.0.12+ds-2_amd64.buildinfo
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trnascan-se_2.0.12+ds-2_amd64.deb

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