Package: src:pbbam Version: 2.4.0+dfsg-2 Severity: serious Tags: forky sid ftbfs User: [email protected] Usertags: ftbfs-nocheck-profile
Dear maintainer: During a rebuild of all packages in unstable using the nocheck build profile, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202512/ A wiki page discussing how to reproduce bugs in this category and possible solutions is available here: https://wiki.debian.org/qa.debian.org/FTBFS/nocheck (It's a wiki, so you are welcome to contribute) About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:pbbam, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpm4p2g9ov Code: extern int i; int i; ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpm4p2g9ov/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpm4p2g9ov/output.obj -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wlogical-op` -> 0 Compiler for C++ supports arguments -Wlogical-op: YES Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpjzeh932o Code: extern int i; int i; ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpjzeh932o/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpjzeh932o/output.obj -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wrestrict` -> 0 Compiler for C++ supports arguments -Wrestrict: YES Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpj2xu88qr Code: extern int i; int i; ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpj2xu88qr/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpj2xu88qr/output.obj -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wnull-dereference` -> 0 Compiler for C++ supports arguments -Wnull-dereference: YES Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpsjhsyklu Code: extern int i; int i; ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpsjhsyklu/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpsjhsyklu/output.obj -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wuseless-cast` -> 0 Compiler for C++ supports arguments -Wuseless-cast: YES Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmph8v6m_t4 Code: extern int i; int i; ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmph8v6m_t4/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmph8v6m_t4/output.obj -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wdouble-promotion` -> 0 Compiler for C++ supports arguments -Wdouble-promotion: YES Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpbr4y0pds Code: extern int i; int i; ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpbr4y0pds/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpbr4y0pds/output.obj -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wshadow` -> 0 Compiler for C++ supports arguments -Wshadow: YES Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp2p_83ofh Code: extern int i; int i; ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp2p_83ofh/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp2p_83ofh/output.obj -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wformat=1` -> 0 Compiler for C++ supports arguments -Wformat=1: YES Run-time dependency threads found: YES Pkg-config binary missing from cross or native file, or env var undefined. Trying a default Pkg-config fallback at pkg-config Found pkg-config: YES (/usr/bin/pkg-config) 1.8.1 Determining dependency 'boost' with pkg-config executable '/usr/bin/pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --modversion boost` -> 1 stderr: Package boost was not found in the pkg-config search path. Perhaps you should add the directory containing `boost.pc' to the PKG_CONFIG_PATH environment variable Package 'boost', required by 'virtual:world', not found ----------- Checking potential boost root /usr/include/c++ Checking potential boost root /usr/include/x86_64-linux-gnu/c++ Checking potential boost root /usr/include/c++/15 Checking potential boost root /usr/lib/gcc/x86_64-linux-gnu/15 Checking potential boost root /usr/local Checking potential boost root /usr/include Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpma1apsy4 Code: ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpma1apsy4/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpma1apsy4/output.obj -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive --print-search-dirs` -> 0 stdout: install: /usr/lib/gcc/x86_64-linux-gnu/15/ programs: =/usr/libexec/gcc/x86_64-linux-gnu/15/:/usr/libexec/gcc/x86_64-linux-gnu/15/:/usr/libexec/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/15/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../../x86_64-linux-gnu/bin/x86_64-linux-gnu/15/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../../x86_64-linux-gnu/bin/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../../x86_64-linux-gnu/bin/ libraries: =/usr/lib/gcc/x86_64-linux-gnu/15/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../../x86_64-linux-gnu/lib/x86_64-linux-gnu/15/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../../x86_64-linux-gnu/lib/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../../x86_64-linux-gnu/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../x86_64-linux-gnu/15/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../../lib/:/lib/x86_64-linux-gnu/15/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/15/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../../x86_64-linux-gnu/lib/:/usr/lib/gcc/x86_64-linux-gnu/15/../../../:/lib/:/usr/lib/ ----------- - potential library dirs: ['/usr/include/librtmp'] - potential include dirs: ['/usr/include'] Checking potential boost root /usr - potential library dirs: ['/usr/lib/gcc/x86_64-linux-gnu/15', '/usr/lib/x86_64-linux-gnu', '/usr/lib'] - potential include dirs: ['/usr/include'] - found boost library dir: /usr/lib/x86_64-linux-gnu - found boost 1.83.0 include dir: /usr/include - filtered library list: - <LIB: -M ------ ??? ? 1_83 boost_iostreams /usr/lib/x86_64-linux-gnu/libboost_iostreams.so.1.83.0> - <LIB: -M ------ ??? ? 1_83 boost_regex /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0> - found: - final compile args: ['-I/usr/include', '-DBOOST_ALL_NO_LIB'] - final link args: [] Run-time dependency Boost found: YES 1.83.0 (/usr) Determining dependency 'zlib' with pkg-config executable '/usr/bin/pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --modversion zlib` -> 0 stdout: 1.3.1 ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --cflags zlib` -> 0 env[PKG_CONFIG_ALLOW_SYSTEM_LIBS]: 1 env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --libs zlib` -> 0 stdout: -L/usr/lib/x86_64-linux-gnu -lz ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --libs zlib` -> 0 stdout: -lz ----------- Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmppxo0o548 Code: #include<stddef.h> #include<stdio.h> int main(void) { printf("%ld\n", (long)(sizeof(void *))); return 0; } ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmppxo0o548/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmppxo0o548/output.exe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -Wl,-z,relro -Wl,-z,now` -> 0 Program stdout: 8 Program stderr: Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp66zzy4l_ Code: int main(void) { return 0; } ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp66zzy4l_/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp66zzy4l_/output.exe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive /usr/lib/x86_64-linux-gnu/libz.so -Wl,--allow-shlib-undefined -Wl,-z,relro -Wl,-z,now` -> 0 Run-time dependency zlib found: YES 1.3.1 Determining dependency 'htslib' with pkg-config executable '/usr/bin/pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --modversion htslib` -> 0 stdout: 1.22.1 ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --cflags htslib` -> 0 env[PKG_CONFIG_ALLOW_SYSTEM_LIBS]: 1 env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --libs htslib` -> 0 stdout: -L/usr/lib/x86_64-linux-gnu -lhts ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --libs htslib` -> 0 stdout: -lhts ----------- Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpov04me7i Code: int main(void) { return 0; } ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpov04me7i/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmpov04me7i/output.exe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive /usr/lib/x86_64-linux-gnu/libhts.so -Wl,--allow-shlib-undefined -Wl,-z,relro -Wl,-z,now` -> 0 Run-time dependency htslib found: YES 1.22.1 Determining dependency 'pbcopper' with pkg-config executable '/usr/bin/pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --modversion pbcopper` -> 0 stdout: 2.3.0 ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --cflags pbcopper` -> 0 env[PKG_CONFIG_ALLOW_SYSTEM_LIBS]: 1 env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --libs pbcopper` -> 0 stdout: -L/usr/lib/x86_64-linux-gnu -lpbcopper ----------- env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --libs pbcopper` -> 0 stdout: -lpbcopper ----------- Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp2g9t1f7k Code: int main(void) { return 0; } ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp2g9t1f7k/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp2g9t1f7k/output.exe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive /usr/lib/x86_64-linux-gnu/libpbcopper.so -Wl,--allow-shlib-undefined -Wl,-z,relro -Wl,-z,now` -> 0 Run-time dependency pbcopper found: YES 2.3.0 Configuring PbbamVersion.cpp using configuration Configuring LibraryVersion.h using configuration Program tools/check-formatting found: YES (/<<PKGBUILDDIR>>/tools/check-formatting) Program python3 found: YES (/usr/bin/python3) Program cram3 found: YES (/usr/bin/cram3) Determining dependency 'gtest_main' with pkg-config executable '/usr/bin/pkg-config' env[PKG_CONFIG_PATH]: env[PKG_CONFIG]: /usr/bin/pkg-config ----------- Called: `/usr/bin/pkg-config --modversion gtest_main` -> 1 stderr: Package gtest_main was not found in the pkg-config search path. Perhaps you should add the directory containing `gtest_main.pc' to the PKG_CONFIG_PATH environment variable Package 'gtest_main', required by 'virtual:world', not found ----------- Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmppt2dw7ow Code: int main(void) { return 0; } ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmppt2dw7ow/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmppt2dw7ow/output.exe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -lgtest -Wl,--allow-shlib-undefined -Wl,-z,relro -Wl,-z,now` -> 1 stderr: /usr/bin/ld: cannot find -lgtest: No such file or directory collect2: error: ld returned 1 exit status ----------- Running compile: Working directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp7esocuxm Code: int main(void) { return 0; } ----------- Command line: `c++ /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp7esocuxm/testfile.cpp -o /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/meson-private/tmp7esocuxm/output.exe -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -D_FILE_OFFSET_BITS=64 -O0 -fpermissive -lgtest_main -Wl,--allow-shlib-undefined -Wl,-z,relro -Wl,-z,now` -> 1 stderr: /usr/bin/ld: cannot find -lgtest_main: No such file or directory collect2: error: ld returned 1 exit status ----------- Run-time dependency GTest found: NO (tried pkgconfig and system) Looking for a fallback subproject for the dependency gtest ERROR: Subproject gtest is buildable: NO ../tests/meson.build:10:18: ERROR: Automatic wrap-based subproject downloading is disabled dh_auto_configure: error: cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/x86_64-linux-gnu -Dpython.bytecompile=-1 returned exit code 1 make: *** [debian/rules:13: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 --------------------------------------------------------------------------------
