Your message dated Wed, 13 May 2026 21:05:43 +0000
with message-id <[email protected]>
and subject line Bug#1131053: fixed in dipy 1.12.1-1
has caused the Debian Bug report #1131053,
regarding dipy: autopkgtest regression with NumPy 2.4
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1131053: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1131053
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: dipy
Version: 1.11.0-3
Severity: important
User: [email protected]
Usertags: numpy2.4
Dear maintainer,
According to https://ci.debian.net data, your package dipy has an
autopkgtest regression with numpy.
The following architectures failed: amd64, arm64.
Hopefully relevant excerpt from
https://ci.debian.net/packages/d/dipy/unstable/amd64/69506513/
follows:
2391s =================================== FAILURES
===================================
2391s E AssertionError:
2391s E Items are not equal:
2391s E ACTUAL: 4
2391s E DESIRED: 2
2391s E AssertionError:
2391s E Items are not equal:
2391s E ACTUAL: 3
2391s E DESIRED: 1
2391s E AssertionError:
2391s E Items are not equal:
2391s E ACTUAL: 4
2391s E DESIRED: 0
2391s E AssertionError:
2391s E Items are not equal:
2391s E ACTUAL: 2
2391s E DESIRED: 0
2391s E AssertionError:
2391s E Items are not equal:
2391s E ACTUAL: 3
2391s E DESIRED: 1
2391s E ValueError: cannot resize an array that references or is referenced
2391s E by another array in this way.
2391s E Use the np.resize function or refcheck=False
2391s E ValueError: cannot resize an array that references or is referenced
2391s E by another array in this way.
2391s E Use the np.resize function or refcheck=False
2391s E ValueError: cannot resize an array that references or is referenced
2391s E by another array in this way.
2391s E Use the np.resize function or refcheck=False
2391s FAILED io/tests/test_io_peaks.py::test_io_peaks_deprecated -
AssertionError:
2391s FAILED
reconst/tests/test_csdeconv.py::test_recursive_response_calibration - ...
2391s FAILED reconst/tests/test_csdeconv.py::test_csdeconv - AssertionError:
2391s FAILED reconst/tests/test_csdeconv.py::test_default_lambda_csdmodel -
Asserti...
2391s FAILED reconst/tests/test_rumba.py::test_rumba - AssertionError:
2391s FAILED tracking/tests/test_streamline.py::test_compress_streamlines -
ValueEr...
2391s FAILED
tracking/tests/test_streamline.py::test_compress_streamlines_identical_points
2391s FAILED
tracking/tests/test_streamline.py::test_compress_streamlines_memory_leaks
2391s = 8 failed, 865 passed, 184 skipped, 44 deselected, 847 warnings in
2250.17s (0:37:30) =
2392s E: pybuild pybuild:485: test: plugin pyproject failed with: exit code=1:
cd /tmp/autopkgtest-lxc.8nmq3lt7/downtmp/autopkgtest_tmp/build; python3.14 -m
pytest -k 'not test_tractogram.py and not test_io_info and not
test_concatenate_flow and not test_convert_tractogram_flow and not test_spike
and not test_normalization and not test_kernel_input and not test_fbc and not
test_concatenate and not test_streamwarp.py and not test_lpca.py and not
test_sfm.py and not test_reconst_csa_csd.py and not test_reconst_rumba.py'
--pyargs dipy
3542s =================================== FAILURES
===================================
3542s E AssertionError:
3542s E Items are not equal:
3542s E ACTUAL: 4
3542s E DESIRED: 2
3542s E AssertionError:
3542s E Items are not equal:
3542s E ACTUAL: 3
3542s E DESIRED: 1
3542s E AssertionError:
3542s E Items are not equal:
3542s E ACTUAL: 4
3542s E DESIRED: 0
3542s E AssertionError:
3542s E Items are not equal:
3542s E ACTUAL: 2
3542s E DESIRED: 0
3542s E AssertionError:
3542s E Items are not equal:
3542s E ACTUAL: 3
3542s E DESIRED: 1
3542s FAILED io/tests/test_io_peaks.py::test_io_peaks_deprecated -
AssertionError:
3542s FAILED
reconst/tests/test_csdeconv.py::test_recursive_response_calibration - ...
3542s FAILED reconst/tests/test_csdeconv.py::test_csdeconv - AssertionError:
3542s FAILED reconst/tests/test_csdeconv.py::test_default_lambda_csdmodel -
Asserti...
3542s FAILED reconst/tests/test_rumba.py::test_rumba - AssertionError:
3542s = 5 failed, 868 passed, 184 skipped, 44 deselected, 847 warnings in
1149.55s (0:19:09) =
3543s E: pybuild pybuild:485: test: plugin pyproject failed with: exit code=1:
cd /tmp/autopkgtest-lxc.8nmq3lt7/downtmp/autopkgtest_tmp/build; python3.13 -m
pytest -k 'not test_tractogram.py and not test_io_info and not
test_concatenate_flow and not test_convert_tractogram_flow and not test_spike
and not test_normalization and not test_kernel_input and not test_fbc and not
test_concatenate and not test_streamwarp.py and not test_lpca.py and not
test_sfm.py and not test_reconst_csa_csd.py and not test_reconst_rumba.py'
--pyargs dipy
3543s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i
python{version} -p "3.14 3.13" --parallel= returned exit code 13
3543s pybuild-autopkgtest: error: /tmp/yxHvXdxZLS/run pybuild-autopkgtest
returned exit code 2
3543s pybuild-autopkgtest FAIL non-zero exit status 25
3543s pybuild-autopkgtest FAIL non-zero exit status 25
--- End Message ---
--- Begin Message ---
Source: dipy
Source-Version: 1.12.1-1
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
dipy, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated dipy package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 13 May 2026 22:46:46 +0200
Source: dipy
Architecture: source
Version: 1.12.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1131053
Changes:
dipy (1.12.1-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
Closes: #1131053
* d/watch: version=5
* Standards-Version: 4.7.4 (routine-update)
* Reflow Uploaders field (cme)
* Remove Priority field (cme)
* Drop default 'Rules-Requires-Root: no' from d/control (routine-
update)
* Add missing build dependency on python3-numpy-dev for command dh_numpy3.
* Ignore tests trying to fetch gold_standard_io from web
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