Your message dated Wed, 05 Aug 2026 13:33:55 +0000
with message-id <[email protected]>
and subject line Bug#1139623: fixed in insighttoolkit5 5.4.6-2
has caused the Debian Bug report #1139623,
regarding insighttoolkit5: FTBFS against HDF5 2.1.0
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1139623: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1139623
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: insighttoolkit5
Version: 5.4.6-1
Severity: important
Tags: ftbfs patch
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Hi,
During a test rebuild of HDF5's reverse dependencies against HDF5 2.1.0
currently in experimental, insighttoolkit5 FTBFS because its build
toolchain doesn't support this new major release.
The attached patch is a workaround for this issue and supports both
HDF5 1.14.6 in unstable and HDF5 2.1.0 in experimental.
Best,
_g.
- -- System Information:
Debian Release: 12.0
Architecture: amd64 (x86_64)
Kernel: Linux 6.1.0-44-amd64 (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
-----BEGIN PGP SIGNATURE-----
iQEzBAEBCgAdFiEEoJObzArDE05WtIyR7+hsbH/+z4MFAmopNg0ACgkQ7+hsbH/+
z4OgvQf/RJJuARaxo6cpKt75tAREnuDA75MNIT3ovo8Z5NYPrpw8cNnJSIMqChig
/jrwpO5e79fzKRGDL7eTEyEUpCx1DMRLWJ9poEuEpte3AhRN4j8/8u8aVh95cWRv
ogjBG0YcUPlXLA0H3xN0Xcm4e67cnwNXQ1yCi/DYL1FqDU/saPFyd7qdU5SJt0UW
b4JduaAmL9CVOPA8ay8TPp8oPMACuIxoyDScUnAIs+3aXxmwahVzCgZc/Aiq2g1D
0zscvHbPAQ0s34nzzO4PyfCyZAj4gsyuG0/BEgP61zRm2hJ/CglZlSqCPpIERK0l
LPf5LUGqv4WwjTJvnVwPBlcYxtP7pg==
=hwfK
-----END PGP SIGNATURE-----
diff -Nru insighttoolkit5-5.4.6/debian/changelog
insighttoolkit5-5.4.6/debian/changelog
--- insighttoolkit5-5.4.6/debian/changelog 2026-05-09 22:03:42.000000000
+0200
+++ insighttoolkit5-5.4.6/debian/changelog 2026-06-07 18:50:21.000000000
+0200
@@ -1,3 +1,10 @@
+insighttoolkit5 (5.4.6-1.1) UNRELEASED; urgency=medium
+
+ * Non-maintainer upload.
+ * Fix FTBFS against HDF5 2.1.0
+
+ -- Gilles Filippini <[email protected]> Sun, 07 Jun 2026 18:50:21 +0200
+
insighttoolkit5 (5.4.6-1) unstable; urgency=medium
[ Steve Robbins ]
diff -Nru insighttoolkit5-5.4.6/debian/rules insighttoolkit5-5.4.6/debian/rules
--- insighttoolkit5-5.4.6/debian/rules 2026-05-09 22:03:42.000000000 +0200
+++ insighttoolkit5-5.4.6/debian/rules 2026-06-07 18:50:10.000000000 +0200
@@ -43,6 +43,7 @@
-DGTEST_SRC=/usr/src/googletest/googletest \
-DITK_USE_SYSTEM_MINC:BOOL=ON \
-DITK_USE_SYSTEM_HDF5:BOOL=ON \
+ -DHDF5_ROOT=/usr/lib/$(DEB_HOST_MULTIARCH)/hdf5/serial \
-DITK_USE_SYSTEM_JPEG:BOOL=ON \
-DITK_USE_SYSTEM_PNG:BOOL=ON \
-DITK_USE_SYSTEM_TIFF:BOOL=OFF \
--- End Message ---
--- Begin Message ---
Source: insighttoolkit5
Source-Version: 5.4.6-2
Done: Pierre Gruet <[email protected]>
We believe that the bug you reported is fixed in the latest version of
insighttoolkit5, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Pierre Gruet <[email protected]> (supplier of updated insighttoolkit5 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 05 Aug 2026 15:14:26 +0200
Source: insighttoolkit5
Architecture: source
Version: 5.4.6-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Pierre Gruet <[email protected]>
Closes: 1139623
Changes:
insighttoolkit5 (5.4.6-2) unstable; urgency=medium
.
* Team upload
* Raising Standards version to 4.7.4 (no change)
* Building with HDF5 2.1.0, thanks to Gilles Filippini (Closes: #1139623)
Checksums-Sha1:
8af01bcb28b280ec9d956add76d6521c36325ccc 2450 insighttoolkit5_5.4.6-2.dsc
333cd0388431b91231db8588797451dccf9b1dfd 24680
insighttoolkit5_5.4.6-2.debian.tar.xz
c917309569528b39f37849d7b5404a8a0c7b591b 6228
insighttoolkit5_5.4.6-2_source.buildinfo
Checksums-Sha256:
8bc136d26ff0b757fea06ba7591adadb8a8da420433aa87cfa9182de79c62b95 2450
insighttoolkit5_5.4.6-2.dsc
c74206d7f0bae3ee93614e018ee5901bf392502b7089d64f0aea754ddaa9fd44 24680
insighttoolkit5_5.4.6-2.debian.tar.xz
6f5adaf04d5f759dee70a6f87170d9d78af8df9fd4e5cf494188c64d1ac30292 6228
insighttoolkit5_5.4.6-2_source.buildinfo
Files:
9be39fa91dd550167dd0ec49e771506f 2450 science optional
insighttoolkit5_5.4.6-2.dsc
85d2448007efbc867d483979bbca7a63 24680 science optional
insighttoolkit5_5.4.6-2.debian.tar.xz
50e09d1fb25edb9c706943881783ca46 6228 science optional
insighttoolkit5_5.4.6-2_source.buildinfo
-----BEGIN PGP SIGNATURE-----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=4eCl
-----END PGP SIGNATURE-----
pgpabwSsM3Woa.pgp
Description: PGP signature
--- End Message ---