Your message dated Thu, 24 Sep 2026 10:04:38 +0000
with message-id <[email protected]>
and subject line Bug#1136238: fixed in gudhi 3.12.0+dfsg-1
has caused the Debian Bug report #1136238,
regarding gudhi: FTBFS with libeigen3-dev 5.0 (major version transition)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
1136238: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1136238
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Package: src:gudhi
Version: 3.11.0+dfsg-2
Severity: important
Tags: sid forky ftbfs
User: [email protected]
Usertags: eigen3-5.0
Dear Maintainer,
your package depends on libeigen3-dev. The upstream released a
new major version of this mathematical library, 5.0.0. Some
basic information about new features and changes in this version
can be found here:
https://libeigen.gitlab.io/releases/5.0/
This is a major version change and may require code changes in packages
depending on eigen3. The key breaking changes include:
- Minimum required C++ standard is now C++14
- Changes in the build system integration
- Some API name changes
gudhi FTBFS with libeigen3-dev 5.0.1. The full build log is available at:
https://debusine.debian.net/debian/developers-gladk-eigen3/artifact/3756250/raw/gudhi_3.11.0+dfsg-2_amd64-2026-05-08T09:15:48Z.build
Here is the most probably relevant part of the failing build log:
===========================================
writing manifest file 'gudhi.egg-info/SOURCES.txt'
removing
'../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi-3.11.0.egg-info'
(and everything under it)
Copying gudhi.egg-info to
../../../../debian/tmp/usr/lib/python3/dist-packages/gudhi-3.11.0.egg-info
Skipping SOURCES.txt
running install_scripts
mv debian/tmp/usr/bin/Nerve \
debian/tmp/usr/bin/gudhi-nerve
mv debian/tmp/usr/bin/VoronoiGIC \
debian/tmp/usr/bin/gudhi-voronoi-gic
mv debian/tmp/usr/bin/Witness_complex_strong_witness_persistence \
debian/tmp/usr/bin/gudhi-witness-complex-strong-witness-persistence
mv: cannot stat
'debian/tmp/usr/bin/Witness_complex_strong_witness_persistence': No such file
or directory
make[1]: *** [debian/rules:80: override_dh_auto_install-arch] Error 1
make[1]: Leaving directory '/build/reproducible-path/gudhi-3.11.0+dfsg'
make: *** [debian/rules:36: binary-arch] Error 2
dpkg-buildpackage: error: debian/rules binary-arch subprocess failed with exit
status 2
===========================================
libeigen3-dev_5.0.1-1 is available in experimental.
When this package version lands into unstable (probably at the beginning
of June 2026), this bug will be increased in severity to serious.
Thanks,
Anton
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--- Begin Message ---
Source: gudhi
Source-Version: 3.12.0+dfsg-1
Done: Gard Spreemann <[email protected]>
We believe that the bug you reported is fixed in the latest version of
gudhi, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Gard Spreemann <[email protected]> (supplier of updated gudhi package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
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Format: 1.8
Date: Thu, 24 Sep 2026 11:14:21 +0200
Source: gudhi
Architecture: source
Version: 3.12.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Gard Spreemann <[email protected]>
Changed-By: Gard Spreemann <[email protected]>
Closes: 1136238
Changes:
gudhi (3.12.0+dfsg-1) unstable; urgency=medium
.
* New upstream version. (Closes: #1136238)
* Build all Python versions together.
* Refresh patches.
* Update dependencies.
* Standards-version 4.7.4.0. No changes needed.
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