Your message dated Mon, 26 Oct 2026 08:23:55 +0000
with message-id <[email protected]>
and subject line Bug#1151537: fixed in pdb-tools 2.7.0-2
has caused the Debian Bug report #1151537,
regarding pdb-tools: FTBFS: E: dh_python3 fs:312: python3-pdbtools includes a
common build directory name 'tests' as a module. Likely due to a mis-configured
build system installing things it shouldn't.
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1151537: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1151537
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:pdb-tools
Version: 2.7.0-1
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, this package failed to build.
Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:
https://people.debian.org/~sanvila/build-logs/202610/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:pdb-tools, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
I: dh_python3 tools:129: replacing shebang in
debian/pdb-tools/usr/bin/pdb_delhetatm
I: dh_python3 tools:129: replacing shebang in
debian/pdb-tools/usr/bin/pdb_shiftres
I: dh_python3 tools:129: replacing shebang in debian/pdb-tools/usr/bin/pdb_sort
I: dh_python3 tools:129: replacing shebang in
debian/pdb-tools/usr/bin/pdb_mkensemble
I: dh_python3 tools:129: replacing shebang in
debian/pdb-tools/usr/bin/pdb_selseg
E: dh_python3 fs:312: python3-pdbtools includes a common build directory name
'tests' as a module. Likely due to a mis-configured build system installing
things it shouldn't.
make: *** [debian/rules:9: binary] Error 1
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit
status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: pdb-tools
Source-Version: 2.7.0-2
Done: Andrius Merkys <[email protected]>
We believe that the bug you reported is fixed in the latest version of
pdb-tools, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andrius Merkys <[email protected]> (supplier of updated pdb-tools package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 26 Oct 2026 03:48:57 -0400
Source: pdb-tools
Architecture: source
Version: 2.7.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <[email protected]>
Changed-By: Andrius Merkys <[email protected]>
Closes: 1151537
Changes:
pdb-tools (2.7.0-2) unstable; urgency=medium
.
* Prevent tests/ directory from installing (Closes: #1151537)
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