Package: wnpp Severity: wishlist Owner: Debian Med team <[email protected]>
* Package name : sourmash Version : 2.0.0~a11 Upstream Author : C. Titus Brown <[email protected]>, Luiz C. Irber, Jr <[email protected]> * URL : http://sourmash.readthedocs.io/en/latest/ * License : BSD-3-Clause Programming Lang: Python, C++ Description : tools for comparing DNA sequences with MinHash sketches Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences. . MinHash sketches provide a lightweight way to store “signatures” of large DNA or RNA sequence collections, and then compare or search them using a Jaccard index. MinHash sketches can be used to identify samples, find similar samples, identify data sets with shared sequences, and build phylogenetic trees (Ondov et al. 2015). . sourmash provides a command line script, a Python library, and a CPython module for MinHash sketches Sourmash is team maintained by Debian-Med at https://salsa.debian.org/med-team/sourmash
