Hi Andreas, […] > i [mkdir] Created dir: /build/prottest-3.4+dfsg/build/empty > [javac] Compiling 120 source files to > /build/prottest-3.4+dfsg/build/classes > [javac] > /build/prottest-3.4+dfsg/src/main/java/es/uvigo/darwin/prottest/ProtTest.java:23: > error: package mpi does not exist > [javac] import mpi.MPI; > [javac] ^ > [javac] > /build/prottest-3.4+dfsg/src/main/java/es/uvigo/darwin/prottest/ProtTest.java:55: > error: package pal.misc does not exist > [javac] import pal.misc.Identifier; > [javac] ^ > [javac] > /build/prottest-3.4+dfsg/src/main/java/es/uvigo/darwin/prottest/ProtTest.java:56: > error: package pal.tree does not exist > [javac] import pal.tree.Tree; > [javac] ^ > [javac] > /build/prottest-3.4+dfsg/src/main/java/es/uvigo/darwin/prottest/util/factory/ProtTestFactory.java:30: > error: package pal.alignment does not exist > [javac] import pal.alignment.Alignment; > [javac] ^ > ... > > > I have no idea why neither mpi nor pal classes are found since I tried > to add mpj and pal but obviously failed.
If I modify buildconf/project.properties to use the Debian paths, I am able to build. I can push my changes to the repo if you want. Cheers Sascha

