Hi, upstream of libsis-jhdf5-java[1] has switched to gradle in its new version that is compatible with HDF5 1.10. I tried to adapt debian/rules from previous manual build to buildsystem=gradle but got:
... Parallel execution is an incubating feature. Evaluating root project 'libsis-jhdf5-java' using build file '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/build.gradle'. Compiling build file '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/build.gradle' using SubsetScriptTransformer. Compiling build file '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/build.gradle' using BuildScriptTransformer. Compiling script '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/javaproject.gradle' using SubsetScriptTransformer. Compiling script '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/repository.gradle' using SubsetScriptTransformer. Compiling script '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/repository.gradle' using BuildScriptTransformer. Creating new cache for metadata-2.23/module-versions, path /build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/.gradle/caches/modules-2/metadata-2.23/module-versions.bin, access org.gradle.cache. internal.DefaultCacheAccess@350dec85 FAILURE: Build failed with an exception. * Where: Build file '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/build.gradle' line: 1 * What went wrong: A problem occurred evaluating root project 'libsis-jhdf5-java'. > Could not resolve all dependencies for configuration 'classpath'. > Could not resolve cisd:cisd-ant-tasks:+. Required by: unspecified:unspecified:unspecified > No cached version listing for cisd:cisd-ant-tasks:+ available for offline mode. * Try: Run with --debug option to get more log output. * Exception is: org.gradle.api.GradleScriptException: A problem occurred evaluating root project 'libsis-jhdf5-java'. at org.gradle.groovy.scripts.internal.DefaultScriptRunnerFactory$ScriptRunnerImpl.run(DefaultScriptRunnerFactory.java:92) ... at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.DynamicVersionResolver.resolve(DynamicVersionResolver.java:67) ... 104 more BUILD FAILED Total time: 5.829 secs Received result Failure[value=org.gradle.initialization.ReportedException: org.gradle.internal.exceptions.LocationAwareException: Build file '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/build. gradle' line: 1 A problem occurred evaluating root project 'libsis-jhdf5-java'.] from daemon DaemonInfo{pid=26176, address=[01070135-56e1-461a-92ea-35d94d1e1ee5 port:41021, addresses:[/0:0:0:0:0:0:0:1, /127.0.0.1]], state=Busy, lastBusy=1534230750655, context=DefaultDaemonContext[uid=37bdd18f-143d-4071-ab24-f17f8d67fb44,javaHome=/usr/lib/jvm/java-10-openjdk-amd64,daemonRegistryDir=/build/libsis-jhdf5-java-18.08~pre+ git20180805.da55947+dfsg/.gradle/daemon,pid=26176,idleTimeout=120000,daemonOpts=-XX:+HeapDumpOnOutOfMemoryError,-Xmx1024m,-Dfile.encoding=UTF-8,-Duser.country=US,-Duser.language=en,-Duser.variant]} (build should be done). Since I had no idea how to fix this I simply tried to remove this dependency definition (ant is installed as Build-Dependency anyway) and thus I tried the following quilt patch: $ git diff diff --git a/debian/patches/fix_build_dir.patch b/debian/patches/fix_build_dir.patch index 1d652b2..163553c 100644 --- a/debian/patches/fix_build_dir.patch +++ b/debian/patches/fix_build_dir.patch @@ -4,7 +4,7 @@ Description: Do not make wrong assumptions about directory name --- a/javaproject.gradle +++ b/javaproject.gradle -@@ -50,7 +50,7 @@ sourceSets { +@@ -50,13 +50,9 @@ sourceSets { buildDir = 'targets/gradle' buildscript { @@ -12,4 +12,10 @@ Description: Do not make wrong assumptions about directory name + apply from: 'repository.gradle' repositories repositoryConfig - +- +- dependencies { +- classpath 'cisd:cisd-ant-tasks:+' +- } + } + + repositories repositoryConfig This leads to: ... FAILURE: Build failed with an exception. * Where: Build file '/build/libsis-jhdf5-java-18.08~pre+git20180805.da55947+dfsg/build.gradle' line: 40 * What went wrong: A problem occurred evaluating root project 'libsis-jhdf5-java'. > Could not resolve all dependencies for configuration ':runtime'. > Could not resolve cisd:cisd-args4j:+. Required by: project : > No cached version listing for cisd:cisd-args4j:+ available for offline mode. > Could not resolve cisd:cisd-base:+. Required by: project : > No cached version listing for cisd:cisd-base:+ available for offline mode. > Could not resolve rinn:restrictions:+. Required by: project : > No cached version listing for rinn:restrictions:+ available for offline mode. * Try: Run with --debug option to get more log output. I wonder how I could deal with these classpath definitions in the gradle input. Or would you suggest to rather stick to manual build as it was done before? Kind regards Andreas. [1] https://salsa.debian.org/med-team/libsis-jhdf5-java -- http://fam-tille.de