Author: tille Date: 2008-09-10 12:18:49 +0000 (Wed, 10 Sep 2008) New Revision: 2471
Added: trunk/packages/agdbnet/ trunk/packages/agdbnet/trunk/ trunk/packages/agdbnet/trunk/debian/ trunk/packages/agdbnet/trunk/debian/changelog trunk/packages/agdbnet/trunk/debian/compat trunk/packages/agdbnet/trunk/debian/control trunk/packages/agdbnet/trunk/debian/copyright trunk/packages/agdbnet/trunk/debian/install trunk/packages/agdbnet/trunk/debian/patches/ trunk/packages/agdbnet/trunk/debian/patches/10_conf_location.patch trunk/packages/agdbnet/trunk/debian/patches/series Log: Inject first non-templated packaging stuff for agdbnet Added: trunk/packages/agdbnet/trunk/debian/changelog =================================================================== --- trunk/packages/agdbnet/trunk/debian/changelog (rev 0) +++ trunk/packages/agdbnet/trunk/debian/changelog 2008-09-10 12:18:49 UTC (rev 2471) @@ -0,0 +1,5 @@ +agdbnet (1.0.0-1) unstable; urgency=low + + * Initial release (Closes: #nnnn) + + -- Andreas Tille <[EMAIL PROTECTED]> Fri, 05 Sep 2008 11:07:50 +0200 Added: trunk/packages/agdbnet/trunk/debian/compat =================================================================== --- trunk/packages/agdbnet/trunk/debian/compat (rev 0) +++ trunk/packages/agdbnet/trunk/debian/compat 2008-09-10 12:18:49 UTC (rev 2471) @@ -0,0 +1 @@ +7 Added: trunk/packages/agdbnet/trunk/debian/control =================================================================== --- trunk/packages/agdbnet/trunk/debian/control (rev 0) +++ trunk/packages/agdbnet/trunk/debian/control 2008-09-10 12:18:49 UTC (rev 2471) @@ -0,0 +1,30 @@ +Source: agdbnet +Section: unknown +Priority: optional +Maintainer: Debian-Med Packaging Team <[EMAIL PROTECTED]> +DM-Upload-Allowed: Yes +Uploaders: Andreas Tille <[EMAIL PROTECTED]> +Build-Depends: debhelper (>= 7), quilt +Standards-Version: 3.8.0 +Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/agdbnet/trunk/?rev=0&sc=0 +Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/agdbnet/trunk/ +Homepage: http://pubmlst.org/software/database/agdbnet/ + +Package: agdbnet +Architecture: any +Depends: ${shlibs:Depends}, ${misc:Depends}, emboss-lib, blast2 +Description: antigen sequence database software for web-based bacterial typing + AgdbNet facilitates simultaneous BLAST querying of multiple loci using + either nucleotide or peptide sequences. Databases are described by XML + files and can have any number of loci, which may be defined by nucleotide + and/or peptide sequences. The databases can optionally have integral + isolate tables so that information about representative isolates can + be retrieved or they may be configured to query external isolate databases, + such as those hosted on PubMLST.org. + . + The software is used on a number of public bacterial typing databases: + * Neisseria PorA variable regions (http://neisseria.org/nm/typing/pora/), + PorB (http://neisseria.org/nm/typing/porb/), + FetA (http://neisseria.org/nm/typing/feta/) + * Campylobacter flaA (http://hercules.medawar.ox.ac.uk/flaA/) + * Streptococcus equi seM (http://pubmlst.org/szooepidemicus/seM/) Added: trunk/packages/agdbnet/trunk/debian/copyright =================================================================== --- trunk/packages/agdbnet/trunk/debian/copyright (rev 0) +++ trunk/packages/agdbnet/trunk/debian/copyright 2008-09-10 12:18:49 UTC (rev 2471) @@ -0,0 +1,28 @@ +X-Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat +X-Debianized-By: Andreas Tille <[EMAIL PROTECTED]> +X-Debinized-Date: Fri, 05 Sep 2008 11:07:50 +0200 +X-Source-Downloaded-From: http://pubmlst.org/software/database/agdbnet/installation.shtml +X-Upstream-Author: 2004-2006 Keith Jolley <[EMAIL PROTECTED]> + +Files: debian/* +Copyright: 2008 Andreas Tille <[EMAIL PROTECTED]> on +License: Same as agdbnet itself + +Files: * +Copyright: (C) 2004-2006 Keith Jolley, University of Oxford + This program is free software; you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation; either version 2 of the License, or + (at your option) any later version. + . + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + . + You should have received a copy of the GNU General Public License along + with this program; if not, write to the Free Software Foundation, Inc., + 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. +X-Comment: On Debian systems, the complete text of the GNU General Public + License can be found in `/usr/share/common-licenses/GPL'. + Added: trunk/packages/agdbnet/trunk/debian/install =================================================================== --- trunk/packages/agdbnet/trunk/debian/install (rev 0) +++ trunk/packages/agdbnet/trunk/debian/install 2008-09-10 12:18:49 UTC (rev 2471) @@ -0,0 +1 @@ +cgi-bin/agdbnet.pl usr/lib/cgi-bin Added: trunk/packages/agdbnet/trunk/debian/patches/10_conf_location.patch =================================================================== --- trunk/packages/agdbnet/trunk/debian/patches/10_conf_location.patch (rev 0) +++ trunk/packages/agdbnet/trunk/debian/patches/10_conf_location.patch 2008-09-10 12:18:49 UTC (rev 2471) @@ -0,0 +1,11 @@ +--- agdbnet_v1.0.0.orig/cgi-bin/agdbnet.pl.orig ++++ agdbnet_v1.0.0/cgi-bin/agdbnet.pl +@@ -35,7 +35,7 @@ + ###################################################### + + ###########Local configuration######################## +-local ( our $configfile = '/usr/local/agdbnet/agdbnet.conf' ); ++local ( our $configfile = '/etc/agdbnet/agdbnet.conf' ); + #######End Local configuration######################## + + local ( Added: trunk/packages/agdbnet/trunk/debian/patches/series =================================================================== --- trunk/packages/agdbnet/trunk/debian/patches/series (rev 0) +++ trunk/packages/agdbnet/trunk/debian/patches/series 2008-09-10 12:18:49 UTC (rev 2471) @@ -0,0 +1 @@ +10_conf_location.dpatch _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
