Author: tille Date: 2009-01-23 14:53:01 +0000 (Fri, 23 Jan 2009) New Revision: 3047
Added: trunk/packages/mlstdbnet/trunk/debian/getrefs.conf trunk/packages/mlstdbnet/trunk/debian/more_examples/ trunk/packages/mlstdbnet/trunk/debian/more_examples/cdif.xml Modified: trunk/packages/mlstdbnet/trunk/debian/config trunk/packages/mlstdbnet/trunk/debian/control trunk/packages/mlstdbnet/trunk/debian/examples trunk/packages/mlstdbnet/trunk/debian/install trunk/packages/mlstdbnet/trunk/debian/po/templates.pot trunk/packages/mlstdbnet/trunk/debian/postinst trunk/packages/mlstdbnet/trunk/debian/template/mlstdbnet.xml trunk/packages/mlstdbnet/trunk/debian/templates Log: Add local example; do not use the generic name 'refs' for the references database but rather mlstdb_refs Modified: trunk/packages/mlstdbnet/trunk/debian/config =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/config 2009-01-23 14:06:09 UTC (rev 3046) +++ trunk/packages/mlstdbnet/trunk/debian/config 2009-01-23 14:53:01 UTC (rev 3047) @@ -135,7 +135,7 @@ # prevents dbconfig-common from asking about these values again :-(( dbc_dbuser='www-data' -dbc_dbname='refs' +dbc_dbname='mlstdb_refs' dbc_authmethod_user="ident" # source dbconfig-common shell library, and call the hook function Modified: trunk/packages/mlstdbnet/trunk/debian/control =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/control 2009-01-23 14:06:09 UTC (rev 3046) +++ trunk/packages/mlstdbnet/trunk/debian/control 2009-01-23 14:53:01 UTC (rev 3047) @@ -11,7 +11,7 @@ Homepage: http://pubmlst.org/software/database/mlstdbnet/ Package: mlstdbnet -Architecture: any +Architecture: all Depends: ${shlibs:Depends}, ${misc:Depends}, emboss, blast2, postgresql-8.3, libcgi-pm-perl, libdbd-pg-perl, libxml-perl, dbconfig-common, apache2, imagemagick | graphicsmagick, bioperl, libmail-sender-perl Modified: trunk/packages/mlstdbnet/trunk/debian/examples =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/examples 2009-01-23 14:06:09 UTC (rev 3046) +++ trunk/packages/mlstdbnet/trunk/debian/examples 2009-01-23 14:53:01 UTC (rev 3047) @@ -1 +1,2 @@ example_xmlfiles/* +debian/more_examples/* Added: trunk/packages/mlstdbnet/trunk/debian/getrefs.conf =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/getrefs.conf (rev 0) +++ trunk/packages/mlstdbnet/trunk/debian/getrefs.conf 2009-01-23 14:53:01 UTC (rev 3047) @@ -0,0 +1 @@ +mlstdb_refs Modified: trunk/packages/mlstdbnet/trunk/debian/install =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/install 2009-01-23 14:06:09 UTC (rev 3046) +++ trunk/packages/mlstdbnet/trunk/debian/install 2009-01-23 14:53:01 UTC (rev 3047) @@ -6,4 +6,5 @@ scripts/*.pl usr/share/mlstdbnet css/stylesheet.css usr/share/mlstdbnet/template conf/* etc/mlstdbnet +debian/getrefs.conf etc/mlstdbnet images usr/share/mlstdbnet Added: trunk/packages/mlstdbnet/trunk/debian/more_examples/cdif.xml =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/more_examples/cdif.xml (rev 0) +++ trunk/packages/mlstdbnet/trunk/debian/more_examples/cdif.xml 2009-01-23 14:53:01 UTC (rev 3047) @@ -0,0 +1,31 @@ +<?xml version="1.0" encoding="ISO-8859-1" ?> +<!DOCTYPE mlst SYSTEM "mlst.dtd"> +<mlst> + +<!-- _________________________________________________________ --> +<!-- Before you start --> +<!-- ________________ --> +<!-- As long as there are values marked like ##this## the --> +<!-- XML file is not usable --> +<!-- Make sure you read /usr/share/doc/mlstdbnet/README.Debian --> +<!-- to learn what has to be done! --> +<!-- _________________________________________________________ --> + +<system + longcode="cdif" + webroot="/cdif" + indexpage="" + dbprof="cdif" + profhome="/cgi-bin/mlstdbnet/mlstdbnet.pl?file=pub-cdif.xml" + description="Clostridium Difficile">Test</system> + +<!-- LOCI --> +<locus fullname="TR6" length="315">TR6</locus> +<locus fullname="TR10" length="396">TR10</locus> + +<!-- PROFILES FIELDS --> +<field type="int" length="5" userupdate="no" comments="primary key">id</field> +<field type="date" maindisplay="no" userupdate="no" length="10" comments="date last modified">datestamp</field> +<field type="int" maindisplay="no" userupdate="no" length="4" comments="curator who entered data,link to users">curator</field> +<field type="int" maindisplay="no" length="4" comments="sender unique name, link to users">sender</field> +</mlst> Modified: trunk/packages/mlstdbnet/trunk/debian/po/templates.pot =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/po/templates.pot 2009-01-23 14:06:09 UTC (rev 3046) +++ trunk/packages/mlstdbnet/trunk/debian/po/templates.pot 2009-01-23 14:53:01 UTC (rev 3047) @@ -8,7 +8,7 @@ msgstr "" "Project-Id-Version: PACKAGE VERSION\n" "Report-Msgid-Bugs-To: [email protected]\n" -"POT-Creation-Date: 2009-01-22 17:45+0100\n" +"POT-Creation-Date: 2009-01-23 08:49+0100\n" "PO-Revision-Date: YEAR-MO-DA HO:MI+ZONE\n" "Last-Translator: FULL NAME <em...@address>\n" "Language-Team: LANGUAGE <[email protected]>\n" @@ -323,13 +323,14 @@ #. Type: string #. Description #: ../templates:12001 -msgid "Database profile" +msgid "name of profiles database" msgstr "" #. Type: string #. Description #: ../templates:12001 msgid "" -"MlstDBNet accepts a database profile. By default this is the same as the " -"database name." +"MlstDBNet accepts a profiles database. By default this is the same as the " +"database name. But you might like to use a different name which can be " +"given here." msgstr "" Modified: trunk/packages/mlstdbnet/trunk/debian/postinst =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/postinst 2009-01-23 14:06:09 UTC (rev 3046) +++ trunk/packages/mlstdbnet/trunk/debian/postinst 2009-01-23 14:53:01 UTC (rev 3047) @@ -1,5 +1,5 @@ #!/bin/sh -# postinst script for agdbdnnet/mlstdbnet +# postinst script for agdbnet/mlstdbnet set -e Modified: trunk/packages/mlstdbnet/trunk/debian/template/mlstdbnet.xml =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/template/mlstdbnet.xml 2009-01-23 14:06:09 UTC (rev 3046) +++ trunk/packages/mlstdbnet/trunk/debian/template/mlstdbnet.xml 2009-01-23 14:53:01 UTC (rev 3047) @@ -16,9 +16,7 @@ webroot="##webroot##" indexpage="" dbprof="##dbprofiles##" - profhome="/cgi-bin/mlstdbnet.pl?file=pub-##dbprofiles##.xml" - noshow="other_name,Z_number,region" - view="isolates" dbtype="st" + profhome="/cgi-bin/mlstdbnet.pl?file=##dbprofiles##.xml" description="##Description##">##PublicDescription##</system> <!-- LOCI --> Modified: trunk/packages/mlstdbnet/trunk/debian/templates =================================================================== --- trunk/packages/mlstdbnet/trunk/debian/templates 2009-01-23 14:06:09 UTC (rev 3046) +++ trunk/packages/mlstdbnet/trunk/debian/templates 2009-01-23 14:53:01 UTC (rev 3047) @@ -158,6 +158,7 @@ Template: mlstdbnet/dbprof Type: string -_Description: Database profile - MlstDBNet accepts a database profile. By default this is the same - as the database name. +_Description: name of profiles database + MlstDBNet accepts a profiles database. By default this is the same + as the database name. But you might like to use a different name + which can be given here. _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
