Author: plessy
Date: 2009-08-24 08:30:05 +0000 (Mon, 24 Aug 2009)
New Revision: 3808
Added:
trunk/packages/libgo-perl/trunk/debian/README.source
trunk/packages/libgo-perl/trunk/debian/patches/fix-pod.patch
Modified:
trunk/packages/libgo-perl/trunk/debian/changelog
trunk/packages/libgo-perl/trunk/debian/compat
trunk/packages/libgo-perl/trunk/debian/control
trunk/packages/libgo-perl/trunk/debian/copyright
trunk/packages/libgo-perl/trunk/debian/patches/series
trunk/packages/libgo-perl/trunk/debian/rules
trunk/packages/libgo-perl/trunk/debian/watch
Log:
New upstream version.
Pacakge completely refreshed with dh-make-perl:
* debian/rules, debian/control and debian/compat and debian/watch
refreshed with dh-make-perl 0.59. This converts the package to
debhelper 7.3 from CDBS.
* Adjusted the list of recommended packages after inspection of
the upstream source code (grep -ri XML . | grep use).
* Added README.source to point to the quilt documentation.
* Refreshed debian/copyright to the latest machine-readable format.
Added: trunk/packages/libgo-perl/trunk/debian/README.source
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/README.source
(rev 0)
+++ trunk/packages/libgo-perl/trunk/debian/README.source 2009-08-24
08:30:05 UTC (rev 3808)
@@ -0,0 +1,2 @@
+This package uses quilt to patch the original upstream files. Please refer to
+‘/usr/share/doc/quilt/README.source’ for more information.
Modified: trunk/packages/libgo-perl/trunk/debian/changelog
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/changelog 2009-08-24 04:01:57 UTC
(rev 3807)
+++ trunk/packages/libgo-perl/trunk/debian/changelog 2009-08-24 08:30:05 UTC
(rev 3808)
@@ -1,3 +1,16 @@
+libgo-perl (0.10-1) unstable; urgency=low
+
+ * New upstream version.
+ * debian/rules, debian/control and debian/compat and debian/watch
+ refreshed with dh-make-perl 0.59. This converts the package to
+ debhelper 7.3 from CDBS.
+ * Adjusted the list of recommended packages after inspection of
+ the upstream source code (grep -ri XML . | grep use).
+ * Added README.source to point to the quilt documentation.
+ * Refreshed debian/copyright to the latest machine-readable format.
+
+ -- Charles Plessy <[email protected]> Mon, 24 Aug 2009 17:24:29 +0900
+
libgo-perl (0.09-1) unstable; urgency=low
* New upstream version
Modified: trunk/packages/libgo-perl/trunk/debian/compat
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/compat 2009-08-24 04:01:57 UTC
(rev 3807)
+++ trunk/packages/libgo-perl/trunk/debian/compat 2009-08-24 08:30:05 UTC
(rev 3808)
@@ -1 +1 @@
-5
+7
Modified: trunk/packages/libgo-perl/trunk/debian/control
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/control 2009-08-24 04:01:57 UTC
(rev 3807)
+++ trunk/packages/libgo-perl/trunk/debian/control 2009-08-24 08:30:05 UTC
(rev 3808)
@@ -1,24 +1,25 @@
Source: libgo-perl
Section: perl
Priority: optional
+Build-Depends: debhelper (>= 7.3), quilt
+Build-Depends-Indep: perl, perl-modules, libdata-stag-perl
Maintainer: Debian-Med Packaging Team
<[email protected]>
DM-Upload-Allowed: yes
Uploaders: Charles Plessy <[email protected]>
-Build-Depends: debhelper (>= 5), cdbs, quilt
-Build-Depends-Indep: libdata-stag-perl, libxml-perl, libxml-writer-perl,
xsltproc
-Standards-Version: 3.7.3
+Standards-Version: 3.8.3
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/libgo-perl/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/libgo-perl/trunk/
Homepage: http://geneontology.sourceforge.net/
Package: libgo-perl
Architecture: all
-Depends: ${perl:Depends}
-Recommends: libdata-stag-perl
-Suggests: xsltproc, libxml-perl, bioperl
+Depends: ${perl:Depends}, ${misc:Depends}, perl-modules,
+ libdata-stag-perl
+Recommends: libxml-libxml-perl, libxml-libxslt-perl, libxml-writer-perl,
libxml-checker-perl, xsltproc
+Suggests: bioperl
Description: perl modules for GO and other OBO ontologies
This is a collection of perl code for dealing with Gene Ontologies (GO) and
- Open Biomedical Ontologies (OBO) style ontologies. It is part of the `go-dev'
+ Open Biomedical Ontologies (OBO) style ontologies. It is part of the ‘go-dev’
distribution, but this Debian package is made from the CPAN archive. This
package contains both scripts (which can be used with no knowledge of perl),
and libraries which will be of use to perl programmers using GO or OBO.
Modified: trunk/packages/libgo-perl/trunk/debian/copyright
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/copyright 2009-08-24 04:01:57 UTC
(rev 3807)
+++ trunk/packages/libgo-perl/trunk/debian/copyright 2009-08-24 08:30:05 UTC
(rev 3808)
@@ -1,18 +1,26 @@
-Format-Specification:
http://wiki.debian.org/Proposals/CopyrightFormat?action=recall&rev=129
-Upstream-Author: Chris Mungall <[email protected]>
-Packaged-By: Charles Plessy <[email protected]>
-Packaged-Date: Mon, 26 Nov 2007 14:56:58 +0900
-Original-Source-Location:
http://search.cpan.org/CPAN/authors/id/C/CM/CMUNGALL/go-perl-0.09.tar.gz
+Machine-readable license summary, see ‘http://dep.debian.net/deps/dep5/’.
-Files: *
-Copyright: © 2000-2008 Chris Mungall <[email protected]>
-License: GPL-1+ | Artistic
- This module is free software. You may distribute under the same terms as perl
itself.
-X-Comment: On Debian systems, the complete text of the GNU General
- Public License can be found in `/usr/share/common-licenses/GPL',
- while the complete text of the Artistic License can be found in
- `/usr/share/common-licenses/Artistic'.
+Name : go-perl
+Contact : Chris Mungall <[email protected]>
+Source :
http://search.cpan.org/CPAN/authors/id/C/CM/CMUNGALL/go-perl-0.10.tar.gz
-Files: debian/*
-Copyright: © 2007,2008 Charles Plessy <[email protected]>
-License: same as go-perl itself
+Copyright : 2000-2009 Chris Mungall <[email protected]>
+License : Perl
+
+ This module is free software. You may distribute under the same terms
as perl itself.
+
+License : Perl
+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of either:
+
+ a) the GNU General Public License as published by the Free Software
+ Foundation; either version 1, or (at your option) any later
+ version, or
+
+ b) the "Artistic License" which comes with Perl.
+
+On Debian systems, the complete text of the latest version of the GNU General
+Public License can be found in ‘/usr/share/common-licenses/GPL’, while the
+complete text of the Artistic License can be found in
+‘/usr/share/common-licenses/Artistic’.
Added: trunk/packages/libgo-perl/trunk/debian/patches/fix-pod.patch
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/patches/fix-pod.patch
(rev 0)
+++ trunk/packages/libgo-perl/trunk/debian/patches/fix-pod.patch
2009-08-24 08:30:05 UTC (rev 3808)
@@ -0,0 +1,14 @@
+Description: Corrects POD documentation
+Author: Charles Plessy <[email protected]>
+Forwarded: no
+--- a/GO/Parser.pm.orig 2009-08-24 17:08:01.000000000 +0900
++++ b/GO/Parser.pm 2009-08-24 17:08:18.000000000 +0900
+@@ -170,6 +170,8 @@
+ filesystem, for fast access. The obj_storable representation may not
+ be portable
+
++=back
++
+ =head2 PARSING ARCHITECTURE
+
+ Each parser fires XML B<events>. The XML events are known as
Modified: trunk/packages/libgo-perl/trunk/debian/patches/series
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/patches/series 2009-08-24
04:01:57 UTC (rev 3807)
+++ trunk/packages/libgo-perl/trunk/debian/patches/series 2009-08-24
08:30:05 UTC (rev 3808)
@@ -1,2 +1,3 @@
fix-whatis-entries.patch
fix-missing-manpages
+fix-pod.patch
Modified: trunk/packages/libgo-perl/trunk/debian/rules
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/rules 2009-08-24 04:01:57 UTC
(rev 3807)
+++ trunk/packages/libgo-perl/trunk/debian/rules 2009-08-24 08:30:05 UTC
(rev 3808)
@@ -1,9 +1,9 @@
#!/usr/bin/make -f
-include /usr/share/cdbs/1/rules/patchsys-quilt.mk
-include /usr/share/cdbs/1/rules/debhelper.mk
-include /usr/share/cdbs/1/class/perlmodule.mk
+%:
+ dh --with quilt $@
-binary-fixup/libgo-perl::
+override_dh_install:
+ dh_install
prename 's/\.pl//' $(CURDIR)/debian/libgo-perl/usr/bin/*
prename 's/\.pl//' $(CURDIR)/debian/libgo-perl/usr/share/man/man1/*.pl*
Modified: trunk/packages/libgo-perl/trunk/debian/watch
===================================================================
--- trunk/packages/libgo-perl/trunk/debian/watch 2009-08-24 04:01:57 UTC
(rev 3807)
+++ trunk/packages/libgo-perl/trunk/debian/watch 2009-08-24 08:30:05 UTC
(rev 3808)
@@ -1,2 +1,2 @@
version=3
-http://search.cpan.org/CPAN/authors/id/C/CM/CMUNGALL/go-perl-([\d\.]*)\.tar.gz
+http://search.cpan.org/dist/go-perl/
.*/go-perl-v?(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz|zip)$
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