Author: domibel-guest
Date: 2009-12-20 20:56:54 +0000 (Sun, 20 Dec 2009)
New Revision: 4468

Added:
   trunk/packages/amide/trunk/debian/
   trunk/packages/amide/trunk/debian/README.Debian
   trunk/packages/amide/trunk/debian/README.source
   trunk/packages/amide/trunk/debian/amide.doc-base
   trunk/packages/amide/trunk/debian/amide.menu
   trunk/packages/amide/trunk/debian/amide_logo_small.xpm
   trunk/packages/amide/trunk/debian/autogen.sh
   trunk/packages/amide/trunk/debian/changelog
   trunk/packages/amide/trunk/debian/compat
   trunk/packages/amide/trunk/debian/control
   trunk/packages/amide/trunk/debian/copyright
   trunk/packages/amide/trunk/debian/deletable.files
   trunk/packages/amide/trunk/debian/dirs
   trunk/packages/amide/trunk/debian/docs
   trunk/packages/amide/trunk/debian/get-orig-source
   trunk/packages/amide/trunk/debian/patched/
   trunk/packages/amide/trunk/debian/patched/50_configure.in.dpatch.failed
   trunk/packages/amide/trunk/debian/patches/
   trunk/packages/amide/trunk/debian/patches/10_all.diff
   trunk/packages/amide/trunk/debian/patches/series
   trunk/packages/amide/trunk/debian/rules
   trunk/packages/amide/trunk/debian/watch
Log:
[svn-inject] Applying Debian modifications to trunk


Property changes on: trunk/packages/amide/trunk/debian
___________________________________________________________________
Added: mergeWithUpstream
   + 1

Added: trunk/packages/amide/trunk/debian/README.Debian
===================================================================
--- trunk/packages/amide/trunk/debian/README.Debian                             
(rev 0)
+++ trunk/packages/amide/trunk/debian/README.Debian     2009-12-20 20:56:54 UTC 
(rev 4468)
@@ -0,0 +1,6 @@
+amide for Debian
+----------------
+
+This package comes without libfame support because of the non-free license.
+
+ -- Dominique Belhachemi <[email protected]>  Sun, 16 Dec 2007 21:32:15 
+0200

Added: trunk/packages/amide/trunk/debian/README.source
===================================================================
--- trunk/packages/amide/trunk/debian/README.source                             
(rev 0)
+++ trunk/packages/amide/trunk/debian/README.source     2009-12-20 20:56:54 UTC 
(rev 4468)
@@ -0,0 +1,3 @@
+Please read 
+/usr/share/doc/quilt/README.source
+for more information.

Added: trunk/packages/amide/trunk/debian/amide.doc-base
===================================================================
--- trunk/packages/amide/trunk/debian/amide.doc-base                            
(rev 0)
+++ trunk/packages/amide/trunk/debian/amide.doc-base    2009-12-20 20:56:54 UTC 
(rev 4468)
@@ -0,0 +1,11 @@
+Document: amide
+Title: Debian amide Manual
+Author: Andy Loening
+Abstract: This manual describes what amide is
+ and how it can be used to
+ analyze medical imaging data sets.
+Section: Science/Medicine
+
+Format: HTML
+Index: /usr/share/gtk-doc/html/amitk/index.html
+Files: /usr/share/gtk-doc/html/amitk/*.html

Added: trunk/packages/amide/trunk/debian/amide.menu
===================================================================
--- trunk/packages/amide/trunk/debian/amide.menu                                
(rev 0)
+++ trunk/packages/amide/trunk/debian/amide.menu        2009-12-20 20:56:54 UTC 
(rev 4468)
@@ -0,0 +1,3 @@
+?package(amide):command="/usr/bin/amide" 
icon="/usr/share/pixmaps/amide_logo_small.xpm" needs="X11" \
+        section="Applications/Science/Medicine" title="AMIDE"
+

Added: trunk/packages/amide/trunk/debian/amide_logo_small.xpm
===================================================================
--- trunk/packages/amide/trunk/debian/amide_logo_small.xpm                      
        (rev 0)
+++ trunk/packages/amide/trunk/debian/amide_logo_small.xpm      2009-12-20 
20:56:54 UTC (rev 4468)
@@ -0,0 +1,367 @@
+/* XPM */
+static char * amide_logo_small_xpm[] = {
+"32 32 332 2",
+"      c None",
+".     c #3230B9",
+"+     c #2F2DA9",
+"@     c #2F2DA4",
+"#     c #2F2DA3",
+"$     c #302E9A",
+"%     c #323067",
+"&     c #343396",
+"*     c #2F2D8C",
+"=     c #2F2D84",
+"-     c #2F2D87",
+";     c #2F2D8A",
+">     c #2F2D8D",
+",     c #2F2D8E",
+"'     c #2F2D89",
+")     c #2F2D85",
+"!     c #2F2D82",
+"~     c #2E2D61",
+"{     c #33317E",
+"]     c #2F2D93",
+"^     c #2F2D98",
+"/     c #2F2D9B",
+"(     c #2F2D9C",
+"_     c #2F2D9A",
+":     c #2F2D96",
+"<     c #2F2D91",
+"[     c #2F2D83",
+"}     c #2F2D81",
+"|     c #2F2D73",
+"1     c #1B1A25",
+"2     c #2F2D4D",
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Added: trunk/packages/amide/trunk/debian/autogen.sh
===================================================================
--- trunk/packages/amide/trunk/debian/autogen.sh                                
(rev 0)
+++ trunk/packages/amide/trunk/debian/autogen.sh        2009-12-20 20:56:54 UTC 
(rev 4468)
@@ -0,0 +1,72 @@
+#!/bin/sh
+#
+#
+#
+# Requires: automake 1.9, autoconf 2.57+
+# Conflicts: autoconf 2.13
+set -e
+
+# Refresh GNU autotools toolchain.
+echo Cleaning autotools files...
+find -type d -name autom4te.cache -print0 | xargs -0 rm -rf \;
+find -type f \( -name missing -o -name install-sh -o -name mkinstalldirs \
+       -o -name depcomp -o -name ltmain.sh -o -name configure \
+       -o -name config.sub -o -name config.guess \
+       -o -name Makefile.in \) -print0 | xargs -0 rm -f
+
+echo Running autoreconf...
+#autoreconf --force --install
+
+
+   # Add here commands to configure the package.
+   intltoolize --copy --force --automake
+   aclocal -I m4
+   libtoolize -f -c
+   automake -f -a -c
+   autoconf -f
+ #  rm -rf autom4te.cache
+
+
+# For the Debian package build
+test -d debian && {
+       # link these in Debian builds
+       rm -f config.sub config.guess
+       ln -s /usr/share/misc/config.sub .
+       ln -s /usr/share/misc/config.guess .
+
+       # refresh list of executable scripts, to avoid possible breakage if
+       # upstream tarball does not include the file or if it is mispackaged
+       # for whatever reason.
+       [ "$1" == "updateexec" ] && {
+               echo Generating list of executable files...
+               rm -f debian/executable.files
+               find -type f -perm +111 ! -name '.*' -fprint 
debian/executable.files
+       }
+
+       # Remove any files in upstream tarball that we don't have in the Debian
+       # package (because diff cannot remove files)
+       version=`dpkg-parsechangelog | awk '/Version:/ { print $2 }' | sed -e 
's/-[^-]\+$//'`
+       source=`dpkg-parsechangelog | awk '/Source:/ { print $2 }' | tr -d ' '`
+       if test -r ../${source}_${version}.orig.tar.gz ; then
+               echo Generating list of files that should be removed...
+               rm -f debian/deletable.files
+               touch debian/deletable.files
+               [ -e debian/tmp ] && rm -rf debian/tmp
+               mkdir debian/tmp
+               ( cd debian/tmp ; tar -zxf 
../../../${source}_${version}.orig.tar.gz )
+               find debian/tmp/ -type f ! -name '.*' -print0 | xargs -0 -ri 
echo '{}' | \
+                 while read -r i ; do
+                       if test -e "${i}" ; then
+                               filename=$(echo "${i}" | sed -e 
's#.*debian/tmp/[^/]\+/##')
+                               test -e "${filename}" || echo "${filename}" 
>>debian/deletable.files
+                       fi
+                 done
+               rm -fr debian/tmp
+       else
+               echo Emptying list of files that should be deleted...
+               rm -f debian/deletable.files
+               touch debian/deletable.files
+       fi
+}
+
+exit 0

Added: trunk/packages/amide/trunk/debian/changelog
===================================================================
--- trunk/packages/amide/trunk/debian/changelog                         (rev 0)
+++ trunk/packages/amide/trunk/debian/changelog 2009-12-20 20:56:54 UTC (rev 
4468)
@@ -0,0 +1,99 @@
+amide (0.9.2-1) unstable; urgency=low
+
+  * New upstream release
+  * put amide under Debian Med team maintenance
+  * changed patch system: using quilt instead of dpatch
+  * added dependency: libavcodec-dev for fly through video generation
+
+ -- Dominique Belhachemi <[email protected]>  Sun, 20 Dec 2009 13:38:23 
-0500
+
+amide (0.9.1-5) unstable; urgency=low
+
+  * debian/control: removed build dependency to libglib1.2-dev
+                    and libglib1.2-dev (Closes: #523561)
+  * debian/control: Standards-Version: 3.8.1
+  * debian/changelog: updated references to GPL-2 and LGPL-2
+
+ -- Dominique Belhachemi <[email protected]>  Sun, 12 Apr 2009 13:01:46 
-0400
+
+amide (0.9.1-4) unstable; urgency=low
+
+   * debian/compat: bumped up to 7
+   * debian/rules: uses "dh_prep" now instead of "dh_clean -k"
+   * desktop category is now: Categories=Graphics;MedicalSoftware;
+   * Add var/lib/scrollkeeper to debian/dirs to so that scrollkeeper-update
+     can use it when run by the build system.
+   * debugging symbols disabled
+   * debian/copyright: is now machine-interpretable
+
+ -- Dominique Belhachemi <[email protected]>  Wed, 19 Feb 2009 09:21:05 
-0500
+
+amide (0.9.1-3) unstable; urgency=low
+
+  * fixed lintian warning: doc-base-uses-applications-section
+  * debian/control: Standards-Version: 3.8.0
+  * debian/control: DM-Upload-Allowed: yes
+
+ -- Dominique Belhachemi <[email protected]>  Fri, 14 Nov 2008 17:10:08 
+0100
+
+amide (0.9.1-2) unstable; urgency=low
+
+   * debian/control: removed builddep libniftiio1-dev (Closes: #460358)
+   * fixed implicit pointer conversion (Closes: #457987)
+
+ -- Dominique Belhachemi <[email protected]>  Sun, 13 Jan 2008 10:53:11 
+0200
+
+
+amide (0.9.1-1) unstable; urgency=low
+
+   * New upstream release
+   * debian-policy 3.7.3 ready
+
+ -- Dominique Belhachemi <[email protected]>  Thu, 20 Dec 2007 22:33:35 
+0200
+
+
+amide (0.8.22-2) unstable; urgency=low
+
+  * debian/control: libvolpack1-dev added
+
+ -- Dominique Belhachemi <[email protected]>  Sun, 16 Dec 2007 23:13:12 
+0200
+
+
+amide (0.8.22-1) unstable; urgency=low
+
+   * New upstream release
+   * make use of autoconf in debian/rules file
+   * small bug-fixes
+   * Back to menu-1 format
+   * all changes can be found in debian/patches folder
+
+ -- Dominique Belhachemi <[email protected]>  Sat, 23 Nov 2007 19:13:12 
+0200
+
+
+amide (0.8.21-4) unstable; urgency=low
+
+  * debian/control: libniftiio1-dev dependency is updated
+
+ -- Dominique Belhachemi <[email protected]>  Mon, 16 Sep 2007 22:10:46 
+0200
+
+
+amide (0.8.21-3) unstable; urgency=low
+
+  * debian/copyright : Add documentation license (GFDL) without optional 
features.
+
+ -- Dominique Belhachemi <[email protected]>  Sat, 28 Jul 2007 02:54:46 
+0200
+
+
+amide (0.8.21-2) unstable; urgency=low
+
+  * Add missing libglib1.2-dev dependency.
+
+ -- Dominique Belhachemi <[email protected]>  Wed, 18 Jul 2007 01:42:45 
+0200
+
+
+amide (0.8.21-1) unstable; urgency=low
+
+  * Initial release (Closes: #409913)
+
+ -- Dominique Belhachemi <[email protected]>  Sun, 15 Jul 2007 21:32:15 
+0200
+

Added: trunk/packages/amide/trunk/debian/compat
===================================================================
--- trunk/packages/amide/trunk/debian/compat                            (rev 0)
+++ trunk/packages/amide/trunk/debian/compat    2009-12-20 20:56:54 UTC (rev 
4468)
@@ -0,0 +1 @@
+7

Added: trunk/packages/amide/trunk/debian/control
===================================================================
--- trunk/packages/amide/trunk/debian/control                           (rev 0)
+++ trunk/packages/amide/trunk/debian/control   2009-12-20 20:56:54 UTC (rev 
4468)
@@ -0,0 +1,26 @@
+Source: amide
+Section: graphics
+Priority: optional
+Maintainer: Debian Med Packaging Team 
<[email protected]>
+Uploaders: Dominique Belhachemi <[email protected]>
+DM-Upload-Allowed: yes
+Build-Depends: gnome-doc-utils, gtk-doc-tools, libtool, automake, intltool,
+ quilt, debhelper (>= 7), autotools-dev, scrollkeeper, libxml-parser-perl, m4,
+ pkg-config, libgtk2.0-dev, libxml2-dev, libgnomecanvas2-dev,
+ libgnomeui-dev, libgsl0-dev, libmdc2-dev, libdcmtk1-dev, libvolpack1-dev,
+ libavcodec-dev
+Standards-Version: 3.8.3
+Vcs-Browser: 
http://svn.debian.org/wsvn/debian-med/trunk/packages/amide/trunk/?rev=0&sc=0
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/amide/trunk/
+Homepage: http://amide.sourceforge.net/
+
+Package: amide
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: software for Medical Imaging
+ AMIDE: (Amide's a Medical Imaging Data Examiner)
+ AMIDE is a tool for viewing and analyzing medical image data sets.
+ It's capabilities include the simultaneous handling of multiple data
+ sets imported from a variety of file formats, image fusion, 3D region
+ of interest drawing and analysis, volume rendering, and rigid body
+ alignments.

Added: trunk/packages/amide/trunk/debian/copyright
===================================================================
--- trunk/packages/amide/trunk/debian/copyright                         (rev 0)
+++ trunk/packages/amide/trunk/debian/copyright 2009-12-20 20:56:54 UTC (rev 
4468)
@@ -0,0 +1,81 @@
+Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat
+Debianized-By: Dominique Belhachemi <[email protected]>
+Debianized-Date: Fri, 20 Apr 2007 21:32:15 +0200
+Original-Source: http://amide.sourceforge.net/
+
+
+Files: debian/*
+Copyright: 2008, Dominique Belhachemi <[email protected]>
+License: GPL-2+
+ The Debian packaging is licensed under the GPL-2 or any later version,
+ see `/usr/share/common-licenses/GPL-2'
+
+
+Files: *
+Copyright:
+ Copyright (©) 2007 by Andy Loening <[email protected]>
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this package; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+ .
+ On Debian systems, the complete text of the GNU General Public 
+ License, version 2 can be found in `/usr/share/common-licenses/GPL-2'.
+
+
+Files:
+ ./src/amitk_xif_sel.h
+ ./src/amitk_xif_sel.c
+ ./src/amitk_dial.h
+ ./src/amitk_dial.c
+Copyright:
+ Copyright (©) 2007 by Andy Loening <[email protected]>
+License: LGPL-2+
+ This library is free software; you can redistribute it and/or
+ modify it under the terms of the GNU Lesser General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later version.
+ .
+ This library is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ Lesser General Public License for more details.
+ .
+ You should have received a copy of the GNU Lesser General Public
+ License along with this library; if not, write to the
+ Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
+ MA 02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU Lesser General Public
+ License, version 2.0 can be found in `/usr/share/common-licenses/LGPL-2'.
+
+
+Files:
+ Documentation
+Copyright:
+ Copyright (©) 2007 by Andy Loening <[email protected]>
+License: GFDL-1.1
+ Permission is granted to copy, distribute and/or modify
+ this document under the terms of the GNU Free
+ Documentation License, Version 1.1 or any later
+ version published by the Free Software Foundation with no
+ Invariant Sections, no Front-Cover Texts, and no Back-Cover
+ Texts. You may obtain a copy of the GNU Free
+ Documentation License from the Free Software
+ Foundation by visiting their Web site (http://www.fsf.org) or by
+ writing to: 
+ Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston,
+ MA 02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU Free Documentation License
+ can be found in `/usr/share/common-licenses/GFDL`

Added: trunk/packages/amide/trunk/debian/deletable.files
===================================================================
--- trunk/packages/amide/trunk/debian/deletable.files                           
(rev 0)
+++ trunk/packages/amide/trunk/debian/deletable.files   2009-12-20 20:56:54 UTC 
(rev 4468)
@@ -0,0 +1,77 @@
+mkinstalldirs
+pixmaps/icons.fig.bak
+pixmaps/compartmental_models.fig.bak
+doc/reference/tmpl/amitk_line_profile.sgml.bak
+doc/reference/tmpl/amide_gnome.sgml.bak
+doc/reference/tmpl/amitk_canvas.sgml.bak
+doc/reference/tmpl/amitk_threshold.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SBYTE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_tree_view.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_progress_dialog.sgml.bak
+doc/reference/tmpl/tb_math.sgml.bak
+doc/reference/tmpl/amitk_raw_data.sgml.bak
+doc/reference/tmpl/amitk_raw_data_USHORT.sgml.bak
+doc/reference/tmpl/amitk_raw_data_FLOAT.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SBYTE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_filter.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_point.sgml.bak
+doc/reference/tmpl/amitk-unused.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SSHORT.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_variable_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_preferences.sgml.bak
+doc/reference/tmpl/amitk_data_set_variable_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_fiducial_mark.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_BOX.sgml.bak
+doc/reference/tmpl/amitk_common.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_CYLINDER.sgml.bak
+doc/reference/tmpl/amitk_object_dialog.sgml.bak
+doc/reference/tmpl/amitk_raw_data_variable_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_ISOCONTOUR_3D.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_color_table.sgml.bak
+doc/reference/tmpl/amitk_roi_FREEHAND_3D.sgml.bak
+doc/reference/tmpl/amitk_data_set.sgml.bak
+doc/reference/tmpl/amitk_data_set_SSHORT_0D_SCALING.sgml.bak
+doc/reference/tmpl/tb_export_data_set.sgml.bak
+doc/reference/tmpl/amitk_study.sgml.bak
+doc/reference/tmpl/stamp-amitk_type_builtins.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_canvas_object.sgml.bak
+doc/reference/tmpl/amitk_type.sgml.bak
+doc/reference/tmpl/amitk_data_set_FLOAT_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_raw_data_DOUBLE.sgml.bak
+doc/reference/tmpl/amitk_space_edit.sgml.bak
+doc/reference/tmpl/amitk_raw_data_UINT.sgml.bak
+doc/reference/tmpl/amide.sgml.bak
+doc/reference/tmpl/amitk_roi_ELLIPSOID.sgml.bak
+doc/reference/tmpl/amitk_raw_data_UBYTE.sgml.bak
+doc/reference/tmpl/amitk_type_builtins.sgml.bak
+doc/reference/tmpl/amitk_data_set_UBYTE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_color_table_menu.sgml.bak
+doc/reference/tmpl/amitk_space.sgml.bak
+doc/reference/tmpl/amitk_marshal.sgml.bak
+doc/reference/tmpl/amitk_roi_FREEHAND_2D.sgml.bak
+doc/reference/tmpl/amitk_data_set_USHORT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SINT.sgml.bak
+doc/reference/tmpl/amitk_roi.sgml.bak
+doc/reference/tmpl/amitk_raw_data_SBYTE.sgml.bak
+doc/reference/tmpl/amitk_data_set_SINT_0D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_data_set_SBYTE_2D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_object.sgml.bak
+doc/reference/tmpl/amitk_window_edit.sgml.bak
+doc/reference/tmpl/amitk_data_set_DOUBLE_1D_SCALING.sgml.bak
+doc/reference/tmpl/amitk_roi_ISOCONTOUR_2D.sgml.bak
+doc/reference/tmpl/amitk_volume.sgml.bak
+doc/reference/tmpl/amitk_data_set_UINT_2D_SCALING.sgml.bak

Added: trunk/packages/amide/trunk/debian/dirs
===================================================================
--- trunk/packages/amide/trunk/debian/dirs                              (rev 0)
+++ trunk/packages/amide/trunk/debian/dirs      2009-12-20 20:56:54 UTC (rev 
4468)
@@ -0,0 +1,2 @@
+usr/bin
+var/lib/scrollkeeper

Added: trunk/packages/amide/trunk/debian/docs
===================================================================
--- trunk/packages/amide/trunk/debian/docs                              (rev 0)
+++ trunk/packages/amide/trunk/debian/docs      2009-12-20 20:56:54 UTC (rev 
4468)
@@ -0,0 +1,2 @@
+todo
+

Added: trunk/packages/amide/trunk/debian/get-orig-source
===================================================================
--- trunk/packages/amide/trunk/debian/get-orig-source                           
(rev 0)
+++ trunk/packages/amide/trunk/debian/get-orig-source   2009-12-20 20:56:54 UTC 
(rev 4468)
@@ -0,0 +1,4 @@
+PACKAGE=amide
+
+wget -c 
http://downloads.sourceforge.net/project/amide/amide/0.9.2/amide-0.9.2.tgz?use_mirror=cdnetworks-us-2
+cp amide-0.9.2.tgz amide_0.9.2.orig.tar.gz

Added: trunk/packages/amide/trunk/debian/patched/50_configure.in.dpatch.failed
===================================================================
--- trunk/packages/amide/trunk/debian/patched/50_configure.in.dpatch.failed     
                        (rev 0)
+++ trunk/packages/amide/trunk/debian/patched/50_configure.in.dpatch.failed     
2009-12-20 20:56:54 UTC (rev 4468)
@@ -0,0 +1,9 @@
+patching file configure.in
+Hunk #1 FAILED at 42.
+Hunk #2 succeeded at 63 (offset 2 lines).
+Hunk #3 FAILED at 84.
+Hunk #4 succeeded at 193 (offset 22 lines).
+Hunk #5 succeeded at 258 (offset 40 lines).
+Hunk #6 succeeded at 391 (offset 40 lines).
+2 out of 6 hunks FAILED -- saving rejects to file configure.in.rej
+md5sum: 5c875d40f9151255a301076e572b2970  
/home/domibel/my-debian-packages/packages/amide/amide-0.9.2/debian/patches/50_configure.in.dpatch

Added: trunk/packages/amide/trunk/debian/patches/10_all.diff
===================================================================
--- trunk/packages/amide/trunk/debian/patches/10_all.diff                       
        (rev 0)
+++ trunk/packages/amide/trunk/debian/patches/10_all.diff       2009-12-20 
20:56:54 UTC (rev 4468)
@@ -0,0 +1,197 @@
+Index: amide-0.9.2/etc/amide.desktop.in
+===================================================================
+--- amide-0.9.2.orig/etc/amide.desktop.in      2009-12-20 15:28:21.000000000 
-0500
++++ amide-0.9.2/etc/amide.desktop.in   2009-12-20 15:33:46.000000000 -0500
+@@ -1,5 +1,4 @@
+ [Desktop Entry]
+-Encoding=UTF-8
+ _GenericName=Medical Image Examiner
+ _Name=Amide
+ _Comment=A Medical Image Data Examiner
+Index: amide-0.9.2/src/mpeg_encode.c
+===================================================================
+--- amide-0.9.2.orig/src/mpeg_encode.c 2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/src/mpeg_encode.c      2009-12-20 15:33:46.000000000 -0500
+@@ -141,7 +141,7 @@
+ /* -------------------------------------------------------- */
+ #ifdef AMIDE_FFMPEG_SUPPORT
+ 
+-#include <ffmpeg/libavcodec/avcodec.h>
++#include <libavcodec/avcodec.h>
+ 
+ 
+ typedef struct {
+Index: amide-0.9.2/src/ui_common.c
+===================================================================
+--- amide-0.9.2.orig/src/ui_common.c   2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/src/ui_common.c        2009-12-20 15:33:46.000000000 -0500
+@@ -46,7 +46,7 @@
+ #include <medcon.h>
+ #endif
+ #ifdef AMIDE_FFMPEG_SUPPORT
+-#include <ffmpeg/libavcodec/avcodec.h>
++#include <libavcodec/avcodec.h>
+ #endif
+ #ifdef AMIDE_LIBFAME_SUPPORT
+ #include <fame_version.h>
+Index: amide-0.9.2/Makefile.am
+===================================================================
+--- amide-0.9.2.orig/Makefile.am       2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/Makefile.am    2009-12-20 15:33:46.000000000 -0500
+@@ -1,5 +1,4 @@
+ ACLOCAL_AMFLAGS = \
+-      -I /usr/local/share/aclocal \
+       -I m4
+ 
+ if DISABLE_DOC
+Index: amide-0.9.2/src/Makefile.am
+===================================================================
+--- amide-0.9.2.orig/src/Makefile.am   2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/src/Makefile.am        2009-12-20 15:35:20.000000000 -0500
+@@ -23,13 +23,11 @@
+       $(GSL_CFLAGS) \
+       $(LIBFAME_CFLAGS) \
+       $(AMIDE_GTK_CFLAGS) \
+-      $(AMIDE_DEBUG_CFLAGS) \
+       $(AMIDE_CHECK_OBSOLETE_CFLAGS) \
+       $(AMIDE_LIBDCMDATA_CFLAGS) \
+-      -I/usr/local/include \
+       $(XMEDCON_CFLAGS) \
+-      $(FFMPEG_CFLAGS) 
+-
++      $(LIBAVCODEC_CFLAGS) \
++      -DG_DISABLE_DEPRECATED
+ 
+ 
+ ## c++ gets the same includes
+@@ -41,12 +39,11 @@
+ # to be behind the DCMTK stuff
+ amide_LDADD = \
+       $(GSL_LIBS) \
+-      $(LIBFAME_LIBS) \
+       $(AMIDE_LIBECAT_LIBS) \
+       $(AMIDE_LIBVOLPACK_LIBS) \
+       $(AMIDE_GTK_LIBS) \
+       $(XMEDCON_LIBS) \
+-      $(FFMPEG_LIBS) \
++      $(LIBAVCODEC_LIBS) \
+       $(AMIDE_LIBDCMDATA_LIBS) \
+       $(AMIDE_LDADD_WIN32) 
+ 
+Index: amide-0.9.2/configure.in
+===================================================================
+--- amide-0.9.2.orig/configure.in      2009-12-20 15:28:21.000000000 -0500
++++ amide-0.9.2/configure.in   2009-12-20 15:35:30.000000000 -0500
+@@ -43,10 +43,10 @@
+ dnl also, need the -headerpad_max_install_name to allow switching
+ dnl the library paths with strings that have longer lengths
+ case "$host_os" in
+-darwin*)      CFLAGS="-g -O2 -Wall"
++darwin*)      CFLAGS="-O2 -Wall"
+               LDFLAGS="-headerpad_max_install_names";;
+-*)            CFLAGS="-g -O6 -Wall"
+-              CXXFLAGS="-g -O6 -Wall";;
++*)            CFLAGS="-O6 -Wall"
++              CXXFLAGS="-O6 -Wall";;
+ esac
+ 
+ if test $CC = "gcc"; then
+@@ -63,7 +63,7 @@
+       read continue_with_bad_gcc
+       if test $continue_with_bad_gcc = "y"; then
+               echo "removing optimizations to reduce potential of compiler 
error"
+-              CFLAGS="-g -O0"
++              CFLAGS="-O0"
+       else
+               exit 1
+       fi
+@@ -86,14 +86,14 @@
+ 
+ dnl check for various libraries and programs that we might need
+ AM_PATH_GSL(1.1.1, FOUND_LIBGSL=yes, FOUND_LIBGSL=no)
+-AC_CHECK_LIB(ecat, matrix_open, FOUND_LIBECAT=yes, FOUND_LIBECAT=no, 
-L/sw/lib)
+-AC_CHECK_LIB(volpack, vpGetErrorString, FOUND_VOLPACK=yes, FOUND_VOLPACK=no, 
-lm -L/sw/lib -L/usr/local/lib)
++AC_CHECK_LIB(ecat, matrix_open, FOUND_LIBECAT=yes, FOUND_LIBECAT=no)
++AC_CHECK_LIB(volpack, vpGetErrorString, FOUND_VOLPACK=yes, FOUND_VOLPACK=no, 
-lm)
+ AM_PATH_XMEDCON(0.10.0, FOUND_XMEDCON=yes, FOUND_XMEDCON=no)
+ 
+ dnl switch to C++ for DCMTK library stuff - also, if pthread is on the 
platform, probably need that
+ AC_LANG_CPLUSPLUS
+ AC_CHECK_LIB(pthread, pthread_mutex_init, THREAD_LIBS="-lpthread", 
THREAD_LIBS="")
+-AC_CHECK_LIB(dcmdata, main, FOUND_DCMDATA=yes, FOUND_DCMDATA=no, -lofstd  -lz 
-L/usr/local/dicom/lib -L/sw/lib $THREAD_LIBS)
++AC_CHECK_LIB(dcmdata, main, FOUND_DCMDATA=yes, FOUND_DCMDATA=no, -lofstd  -lz 
$THREAD_LIBS)
+ 
+ dnl trying to phase out libfame use in favor of ffmpeg
+ PKG_CHECK_MODULES(FFMPEG, libavcodec >= 51.45.0, FOUND_FFMPEG=yes, 
FOUND_FFMPEG=no);
+@@ -193,7 +193,7 @@
+       AC_DEFINE(AMIDE_LIBMDC_SUPPORT, 1, Define to compile with (X)MedCon)
+ 
+       dnl 2007.10.28 - new xmedcon's should be using glib2/gtk2, dont' have 
to overwrite XMEDCON_LIBS
+-      dnl XMEDCON_LIBS="-L/usr/local/lib -L/usr/local/xmedcon/lib -lmdc"
++      dnl XMEDCON_LIBS="-lmdc"
+       AC_SUBST(XMEDCON_LIBS)
+ else
+       echo "Compiling without xmedcon/libmdc file support"
+@@ -224,29 +224,27 @@
+       enable_ffmpeg="$enableval", 
+       enable_ffmpeg=yes)
+ 
++      PKG_CHECK_MODULES(LIBAVCODEC, libavcodec)
++#     PKG_CHECK_MODULES(LIBAVFORMAT, libavformat)
++#     PKG_CHECK_MODULES(LIBSWSCALE, libswscale)
++#     PKG_CHECK_MODULES(LIBAVUTIL, libavutil)
++
++        AC_SUBST(LIBAVCODEC_LIBS)
++        AC_SUBST(LIBAVCODEC_CFLAGS)
++#     AC_SUBST(LIBAVFORMAT_LIBS)
++#     AC_SUBST(LIBAVFORMAT_CFLAGS)
++#     AC_SUBST(LIBSWSCALE_LIBS)
++#     AC_SUBST(LIBSWSCALE_CFLAGS)
++#     AC_SUBST(LIBAVUTIL_LIBS)
++#     AC_SUBST(LIBAVUTIL_CFLAGS)
++
+ if (test $enable_ffmpeg = yes) && (test $FOUND_FFMPEG = yes); then
+       echo "Compiling with ffmpeg (libavcodec) mpeg encoding support "
+       AC_DEFINE(AMIDE_FFMPEG_SUPPORT, 1, Define to compile with ffmpeg)
+       AC_SUBST(FFMPEG_LIBS)
+       AC_SUBST(FFMPEG_CFLAGS)
+ else
+-      echo "Compiling without ffmpeg (libavcodec) mpeg encoding support"
+-
+-      dnl Let people compile with libfame mpeg movie generation if not using 
ffmpeg
+-      AM_PATH_LIBFAME(0.9.1, FOUND_LIBFAME=yes, FOUND_LIBFAME=no)
+-      dnl AC_CHECK_LIB(libfame, fame_init, FOUND_LIBFAME=yes, 
FOUND_LIBFAME=no)
+-      AC_ARG_ENABLE(
+-              libfame,
+-                      [  --enable-libfame       Compile in libfame mpeg 
encoding support if not using ffmpeg [default=no]], 
+-                      enable_libfame="$enableval",             
+-                      enable_libfame=no)      
+-
+-      if (test $enable_libfame = yes) && (test $FOUND_LIBFAME = yes); then
+-              echo "Compiling with libfame mpeg encoding support "
+-              AC_DEFINE(AMIDE_LIBFAME_SUPPORT, 1, Define to compile with 
Libfame)
+-      else
+-              echo "Compiling without libfame mpeg encoding support"
+-      fi
++      echo "Compiling without ffmpeg support"
+ fi
+ 
+ dnl Let people compile without the DCMTK library
+@@ -258,8 +256,8 @@
+ 
+ if (test $enable_libdcmdata = yes) && (test $FOUND_DCMDATA = yes); then
+       echo "Compiling with DCMTK support for DICOM files"
+-      AMIDE_LIBDCMDATA_LIBS="-L/usr/local/dicom/lib -ldcmdata -lofstd -lz 
$THREAD_LIBS"
+-      AMIDE_LIBDCMDATA_CFLAGS="-I/usr/local/dicom/include/dcmtk/dcmdata 
-I/usr/local/dicom/include/dcmtk/ofstd -I/usr/local/dicom/include 
-I/usr/include/dcmtk/dcmdata -I/usr/local/include/dcmtk/ofstd 
-I/sw/include/dcmtk/dcmdata -I/sw/include/dcmtk/ofstd -I/sw/include/dcmtk"
++      AMIDE_LIBDCMDATA_LIBS="-ldcmdata -lofstd -lz $THREAD_LIBS"
++      AMIDE_LIBDCMDATA_CFLAGS="-I/usr/include/dcmtk/dcmdata"
+       AC_SUBST(AMIDE_LIBDCMDATA_LIBS)
+       AC_SUBST(AMIDE_LIBDCMDATA_CFLAGS)
+       AC_DEFINE(AMIDE_LIBDCMDATA_SUPPORT, 1, Define to compile with DCMTK)
+@@ -391,6 +389,3 @@
+ dnl help/C/Makefile
+ dnl help/es/Makefile
+ 
+-dnl Move the spec file so it won't get eaten by make distclean
+-echo "Moving SPEC file to base directory"
+-mv etc/amide.spec ./

Added: trunk/packages/amide/trunk/debian/patches/series
===================================================================
--- trunk/packages/amide/trunk/debian/patches/series                            
(rev 0)
+++ trunk/packages/amide/trunk/debian/patches/series    2009-12-20 20:56:54 UTC 
(rev 4468)
@@ -0,0 +1 @@
+10_all.diff

Added: trunk/packages/amide/trunk/debian/rules
===================================================================
--- trunk/packages/amide/trunk/debian/rules                             (rev 0)
+++ trunk/packages/amide/trunk/debian/rules     2009-12-20 20:56:54 UTC (rev 
4468)
@@ -0,0 +1,151 @@
+#!/usr/bin/make -f
+
+PACKAGE=amide
+
+# quilt
+DEB_SOURCE_PACKAGE:=$(PACKAGE)
+include /usr/share/quilt/quilt.make
+
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+
+# These are used for cross-compiling and for saving the configure script
+# from having to guess our platform (since we know it already)
+DEB_HOST_GNU_TYPE   ?= $(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)
+DEB_BUILD_GNU_TYPE  ?= $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE)
+
+
+# FOR AUTOCONF 2.52 AND NEWER ONLY
+CONFFLAGS =
+ifeq ($(DEB_BUILD_GNU_TYPE), $(DEB_HOST_GNU_TYPE))
+  CONFFLAGS += --build $(DEB_HOST_GNU_TYPE)
+else
+  CONFFLAGS += --build $(DEB_BUILD_GNU_TYPE) --host $(DEB_HOST_GNU_TYPE)
+endif
+
+CFLAGS:=   -Wall -pipe
+CXXFLAGS:= -Wall -pipe
+ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS)))
+        CFLAGS += -O0
+        CXXFLAGS += -O0
+else
+        CFLAGS += -O2
+endif
+
+get-orig-source:
+       /bin/sh $(CURDIR)/debian/get-orig-source
+
+configure: configure-stamp
+configure-stamp: $(QUILT_STAMPFN)
+       dh_testdir
+
+       chmod +x debian/autogen.sh
+       debian/autogen.sh
+
+       ln -sf /usr/share/misc/config.sub .
+       ln -sf /usr/share/misc/config.guess .
+       rm -f config.cache
+
+       ./configure CFLAGS="$(CFLAGS)" CXXFLAGS="$(CXXFLAGS)" \
+               $(CONFFLAGS) \
+               --disable-amide-debug \
+               --config-cache \
+               --disable-dependency-tracking \
+               --enable-rpm-install \
+               --prefix=/usr \
+               --localstatedir=/var/lib/amide \
+               --mandir=\$${prefix}/share/man \
+               --infodir=\$${prefix}/share/info \
+               --localstatedir=/var/lib/amide \
+               LDFLAGS="-Wl,-z,defs"
+
+       touch $@
+
+
+build: build-arch
+
+build-arch: build-arch-stamp
+
+build-arch-stamp: configure
+       dh_testdir
+
+       $(MAKE)
+
+       touch $@
+
+#config.status: patch configure
+#      dh_testdir
+       # Add here commands to configure the package.
+       #aclocal -I macros
+       #libtoolize -f -c
+       #automake -f -a -c
+       #autoconf -f
+#      ./configure $(CONFIGURE_FLAGS)
+
+
+
+clean: clean-patched unpatch
+
+clean-patched:
+       dh_testdir
+       dh_testroot
+       rm -f build-stamp configure-stamp
+
+       [ ! -f Makefile ] || $(MAKE) clean
+       [ ! -f Makefile ] || $(MAKE) distclean
+
+
+       find \( -name config.sub -o -name config.guess \) -print0 | xargs -0 -r 
rm -f \;
+
+
+       # Fix permissions
+       if [ -r debian/executable.files ] ; then \
+               find -type d -print0 | xargs -0 -r chmod 755 ;\
+               find -type f ! -name 'rules' -print0 | xargs -0 -r chmod 644 ;\
+               xargs -t -r chmod +x < debian/executable.files ;\
+       fi
+
+       # Final static cleanups
+       if [ -r debian/deletable.files ] ; then \
+               xargs -t -r rm -f < debian/deletable.files ;\
+       fi
+
+
+       dh_clean 
+
+
+install: build
+       dh_testdir
+       dh_testroot
+       dh_prep
+       dh_installdirs
+
+       # Add here commands to install the package into debian/amide.
+       $(MAKE) DESTDIR=$(CURDIR)/debian/amide install
+       install -d debian/amide/usr/share/pixmaps
+       cp debian/amide_logo_small.xpm 
debian/amide/usr/share/pixmaps/amide_logo_small.xpm
+       rm -rf debian/amide/var
+
+# Build architecture-dependent files here.
+binary-arch: install
+       dh_testdir
+       dh_testroot
+       dh_installchangelogs ChangeLog
+       dh_installdocs
+       dh_installexamples
+       dh_installman
+       dh_link
+       dh_installmenu
+       dh_strip
+       dh_compress
+       dh_fixperms
+       dh_installdeb
+       dh_shlibdeps
+       dh_gencontrol
+       dh_md5sums
+       dh_builddeb
+
+binary: binary-arch
+.PHONY: build clean binary-indep binary-arch binary install 


Property changes on: trunk/packages/amide/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/amide/trunk/debian/watch
===================================================================
--- trunk/packages/amide/trunk/debian/watch                             (rev 0)
+++ trunk/packages/amide/trunk/debian/watch     2009-12-20 20:56:54 UTC (rev 
4468)
@@ -0,0 +1,9 @@
+# Example watch control file for uscan
+# Rename this file to "watch" and then you can run the "uscan" command
+# to check for upstream updates and more.
+# See uscan(1) for format
+
+# Compulsory line, this is a version 3 file
+version=3
+
+http://sf.net/amide/amide-(0.*)\.tgz


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