Author: malex-guest Date: 2011-01-30 11:10:31 +0000 (Sun, 30 Jan 2011) New Revision: 5808
Modified: trunk/packages/vienna-rna/trunk/debian/control Log: Modified: trunk/packages/vienna-rna/trunk/debian/control =================================================================== --- trunk/packages/vienna-rna/trunk/debian/control 2011-01-30 10:59:45 UTC (rev 5807) +++ trunk/packages/vienna-rna/trunk/debian/control 2011-01-30 11:10:31 UTC (rev 5808) @@ -36,23 +36,9 @@ Package: vienna-rna-doc Section: doc Architecture: all -Description: RNA sequence analysis +Description: RNA sequence analysis documentation package The Vienna RNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures. It is developed and maintained by the group of Ivo Hofacker in Vienna. . - RNA secondary structure prediction through energy minimization is the - most used function in the package. We provide three kinds of dynamic - programming algorithms for structure prediction: the minimum free energy - algorithm of (Zuker & Stiegler 1981) which yields a single optimal - structure, the partition function algorithm of (McCaskill 1990) which - calculates base pair probabilities in the thermodynamic ensemble, and - the suboptimal folding algorithm of (Wuchty et.al 1999) which generates - all suboptimal structures within a given energy range of the optimal - energy. For secondary structure comparison, the package contains several - measures of distance (dissimilarities) using either string alignment or - tree-editing (Shapiro & Zhang 1990). Finally, we provide an algorithm - to design sequences with a predefined structure (inverse folding). - - _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
