Author: holland-guest
Date: 2011-01-30 12:49:03 +0000 (Sun, 30 Jan 2011)
New Revision: 5818
Modified:
trunk/packages/ensembl/ensembl/57/debian/ensembl.dirs
trunk/packages/ensembl/ensembl/57/debian/ensembl.links
trunk/packages/ensembl/ensembl/57/debian/ensembl.postinst
trunk/packages/ensembl/ensembl/57/debian/init.d
Log:
iFinal Ensembl tweaks, I think it installs now.
Modified: trunk/packages/ensembl/ensembl/57/debian/ensembl.dirs
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.dirs 2011-01-30
12:36:08 UTC (rev 5817)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.dirs 2011-01-30
12:49:03 UTC (rev 5818)
@@ -1,11 +1,11 @@
+etc/default/ensembl.d
var
var/log
var/log/ensembl
-var/log
-usr/share/ensembl/logs
-etc/default/ensembl.d
var/cache
var/cache/ensembl
var/cache/ensembl/img-cache
+var/tmp
+var/tmp/ensembl
var/tmp/ensembl/img-tmp
var/tmp/ensembl/tmp
Modified: trunk/packages/ensembl/ensembl/57/debian/ensembl.links
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.links 2011-01-30
12:36:08 UTC (rev 5817)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.links 2011-01-30
12:49:03 UTC (rev 5818)
@@ -1,4 +1,6 @@
-/usr/share/ensembl/logs /var/log/ensembl
-/usr/share/ensembl/img-cache /var/cache/ensembl/img-cache
-/usr/share/ensembl/img-tmp /var/tmp/ensembl/img-tmp
-/usr/share/ensembl/tmp /var/tmp/ensembl/tmp
+#Commented because tried to do it here but didn't work, so
+# we are using postinst instead
+#/usr/share/ensembl/logs /var/log/ensembl
+#/usr/share/ensembl/img-cache /var/cache/ensembl/img-cache
+#/usr/share/ensembl/img-tmp /var/tmp/ensembl/img-tmp
+#/usr/share/ensembl/tmp /var/tmp/ensembl/tmp
Modified: trunk/packages/ensembl/ensembl/57/debian/ensembl.postinst
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/ensembl.postinst 2011-01-30
12:36:08 UTC (rev 5817)
+++ trunk/packages/ensembl/ensembl/57/debian/ensembl.postinst 2011-01-30
12:49:03 UTC (rev 5818)
@@ -29,16 +29,20 @@
continue;
elif [ -L "$d" ]; then
# a presumed remnant of a previous installation
pointing to /usr/share/ensembl
- rm "$d"
+ rm -rf "$d"
elif [ -r "$d" ]; then
echo "File '$d' should be a directory - something is
wrong."
exit 1;
fi
echo "Creating directory '$d'."
mkdir -p "$d"
- chown nobody.nogroup "$d"
+ chown nobody:nogroup "$d"
chmod 755 "$d"
done
+ ln -sf /var/log/ensembl /usr/share/ensembl/logs
+ ln -sf /var/cache/ensembl/img-cache /usr/share/ensembl/img-cache
+ ln -sf /var/tmp/ensembl/img-tmp /usr/share/ensembl/img-tmp
+ ln -sf /var/tmp/ensembl/tmp /usr/share/ensembl/tmp
echo "Enabling Apache modules."
a2enmod perl
Modified: trunk/packages/ensembl/ensembl/57/debian/init.d
===================================================================
--- trunk/packages/ensembl/ensembl/57/debian/init.d 2011-01-30 12:36:08 UTC
(rev 5817)
+++ trunk/packages/ensembl/ensembl/57/debian/init.d 2011-01-30 12:49:03 UTC
(rev 5818)
@@ -91,12 +91,12 @@
# /var/cache/ensembl/img-cache # this is set as a symlink
further down
# /var/tmp/ensembl/img-tmp # another symlink set further
down
# /var/tmp/ensembl/tmp # and yet another one
- for d in /usr/share/ensembl/tmp /var/cache/ensembl
- do
- if [ ! -d "$d" ]; then mkdir $d; fi
- chown nobody:nogroup -R "$d"
- chmod 755 "$d"
- done
+ #for d in /usr/share/ensembl/tmp /var/cache/ensembl
+ #do
+ # if [ ! -d "$d" ]; then mkdir $d; fi
+ # chown nobody:nogroup -R "$d"
+ # chmod 755 "$d"
+ #done
log_daemon_msg "Starting web server" "ensembl"
if $APACHE2CTL start; then
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