Author: osallou-guest
Date: 2011-03-01 15:48:53 +0000 (Tue, 01 Mar 2011)
New Revision: 6137
Added:
trunk/packages/gbrowse/trunk/debian/lintian.overrides
Modified:
trunk/packages/gbrowse/trunk/debian/patches/debian-packaging-patch
Log:
update lintian+patch
Added: trunk/packages/gbrowse/trunk/debian/lintian.overrides
===================================================================
--- trunk/packages/gbrowse/trunk/debian/lintian.overrides
(rev 0)
+++ trunk/packages/gbrowse/trunk/debian/lintian.overrides 2011-03-01
15:48:53 UTC (rev 6137)
@@ -0,0 +1,13 @@
+gbrowse: manpage-has-errors-from-man
usr/share/man/man3/Bio::DB::GFF::Aggregator::match_gap.3pm.gz 158: warning [p
1, 4.2i]: can't break line
+gbrowse: manpage-has-bad-whatis-entry
usr/share/man/man3/Bio::DB::GFF::Aggregator::reftranscript.3pm.gz
+gbrowse: manpage-has-errors-from-pod2man
usr/share/man/man3/Bio::Graphics::Browser2::AuthorizedFeatureFile.3pm.gz:142
+gbrowse: manpage-has-errors-from-pod2man
usr/share/man/man3/Bio::Graphics::Browser2::DataBase.3pm.gz:145
+gbrowse: manpage-has-bad-whatis-entry
usr/share/man/man3/Bio::Graphics::Browser2::DataSource.3pm.gz
+gbrowse: manpage-has-errors-from-pod2man
usr/share/man/man3/Bio::Graphics::Browser2::DataSource.3pm.gz:265
+gbrowse: manpage-has-errors-from-man
usr/share/man/man3/Bio::Graphics::Browser2::PluginSet.3pm.gz 139: warning [p 1,
1.8i, div `an-div', 0.2i]: can't break line
+gbrowse: manpage-has-bad-whatis-entry
usr/share/man/man3/Bio::Graphics::Browser2::Region.3pm.gz
+gbrowse: manpage-has-bad-whatis-entry
usr/share/man/man3/Bio::Graphics::Browser2::Render.3pm.gz
+gbrowse: manpage-has-bad-whatis-entry
usr/share/man/man3/Bio::Graphics::Browser2::RenderPanels.3pm.gz
+gbrowse: manpage-has-bad-whatis-entry
usr/share/man/man3/Legacy::Graphics::Browser.3pm.gz
+gbrowse: binary-without-manpage usr/bin/gbrowse_syn_load_alignment_database
+gbrowse: binary-without-manpage usr/bin/gbrowse_syn_load_alignments_msa
Modified: trunk/packages/gbrowse/trunk/debian/patches/debian-packaging-patch
===================================================================
--- trunk/packages/gbrowse/trunk/debian/patches/debian-packaging-patch
2011-03-01 14:57:25 UTC (rev 6136)
+++ trunk/packages/gbrowse/trunk/debian/patches/debian-packaging-patch
2011-03-01 15:48:53 UTC (rev 6137)
@@ -330,3 +330,23 @@
+.SH AUTHOR
+Olivier Sallou (olivier.sallou (at) irisa.fr) - Man page and packaging
+Lincoln Stein - GBrowse
+--- a/lib/Bio/DB/GFF/Aggregator/match_gap.pm
++++ b/lib/Bio/DB/GFF/Aggregator/match_gap.pm
+@@ -34,7 +34,6 @@
+ should be sufficient for simple nucleotide to nucleotide
+ alignments.
+
+-################################################################################
+
+ =cut
+
+--- a/lib/Bio/DB/GFF/Aggregator/reftranscript.pm
++++ b/lib/Bio/DB/GFF/Aggregator/reftranscript.pm
+@@ -1,6 +1,6 @@
+ =head1 NAME
+
+-package Bio::DB::GFF::Aggregator::reftranscript -- Aggregates references
transcripts
++Bio::DB::GFF::Aggregator::reftranscript -- Aggregates references transcripts
+
+ =head1 SYNOPSIS
+
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