Author: tbooth-guest
Date: 2011-04-08 17:23:08 +0000 (Fri, 08 Apr 2011)
New Revision: 6490
Added:
trunk/packages/cdbfasta/trunk/debian/cdbfasta.dirs
trunk/packages/cdbfasta/trunk/debian/cdbfasta.manpages
trunk/packages/cdbfasta/trunk/debian/patches/
trunk/packages/cdbfasta/trunk/debian/patches/add-install-target-to-makefile
trunk/packages/cdbfasta/trunk/debian/patches/series
Removed:
trunk/packages/cdbfasta/trunk/debian/cdbfasta.doc-base.EX
Modified:
trunk/packages/cdbfasta/trunk/debian/changelog
trunk/packages/cdbfasta/trunk/debian/control
trunk/packages/cdbfasta/trunk/debian/copyright
Log:
Took stub package from Steffen and made something close to finished.
Need to confirm license terms - they are a bit vague.
Version numbering is a bit pants.
Added: trunk/packages/cdbfasta/trunk/debian/cdbfasta.dirs
===================================================================
--- trunk/packages/cdbfasta/trunk/debian/cdbfasta.dirs
(rev 0)
+++ trunk/packages/cdbfasta/trunk/debian/cdbfasta.dirs 2011-04-08 17:23:08 UTC
(rev 6490)
@@ -0,0 +1 @@
+/usr/bin
Deleted: trunk/packages/cdbfasta/trunk/debian/cdbfasta.doc-base.EX
===================================================================
--- trunk/packages/cdbfasta/trunk/debian/cdbfasta.doc-base.EX 2011-04-08
16:01:39 UTC (rev 6489)
+++ trunk/packages/cdbfasta/trunk/debian/cdbfasta.doc-base.EX 2011-04-08
17:23:08 UTC (rev 6490)
@@ -1,20 +0,0 @@
-Document: cdbfasta
-Title: Debian cdbfasta Manual
-Author: <insert document author here>
-Abstract: This manual describes what cdbfasta is
- and how it can be used to
- manage online manuals on Debian systems.
-Section: unknown
-
-Format: debiandoc-sgml
-Files: /usr/share/doc/cdbfasta/cdbfasta.sgml.gz
-
-Format: postscript
-Files: /usr/share/doc/cdbfasta/cdbfasta.ps.gz
-
-Format: text
-Files: /usr/share/doc/cdbfasta/cdbfasta.text.gz
-
-Format: HTML
-Index: /usr/share/doc/cdbfasta/html/index.html
-Files: /usr/share/doc/cdbfasta/html/*.html
Added: trunk/packages/cdbfasta/trunk/debian/cdbfasta.manpages
===================================================================
--- trunk/packages/cdbfasta/trunk/debian/cdbfasta.manpages
(rev 0)
+++ trunk/packages/cdbfasta/trunk/debian/cdbfasta.manpages 2011-04-08
17:23:08 UTC (rev 6490)
@@ -0,0 +1,2 @@
+cdbfasta.1
+cdbyank.1
Modified: trunk/packages/cdbfasta/trunk/debian/changelog
===================================================================
--- trunk/packages/cdbfasta/trunk/debian/changelog 2011-04-08 16:01:39 UTC
(rev 6489)
+++ trunk/packages/cdbfasta/trunk/debian/changelog 2011-04-08 17:23:08 UTC
(rev 6490)
@@ -1,3 +1,10 @@
+cdbfasta (0.981-20100722-1ubuntu2) lucid; urgency=low
+
+ * Continued work on package - added basic manapages
+ * Changed description in control file
+
+ -- Tim Booth <[email protected]> Fri, 08 Apr 2011 18:05:51 +0100
+
cdbfasta (0.981-20100722-1) unstable; urgency=low
* Initial release (Closes: #nnnn)
Modified: trunk/packages/cdbfasta/trunk/debian/control
===================================================================
--- trunk/packages/cdbfasta/trunk/debian/control 2011-04-08 16:01:39 UTC
(rev 6489)
+++ trunk/packages/cdbfasta/trunk/debian/control 2011-04-08 17:23:08 UTC
(rev 6490)
@@ -2,7 +2,7 @@
Section: science
Priority: extra
Maintainer: Steffen Moeller <[email protected]>
-Build-Depends: debhelper (>= 7.0.50~)
+Build-Depends: debhelper (>= 7.0.50~), help2man
Standards-Version: 3.9.1
Homepage: http://sourceforge.net/projects/cdbfasta/
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/cdbfasta/trunk/?rev=0&sc=0
@@ -11,6 +11,5 @@
Package: cdbfasta
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
-Description: Fasta file indexing and retrival tool
- The tool performs a suitable indexing of the result
- files from next generation sequencing machines.
+Description: Fasta file indexing and retrieval tool
+ Fast indexing and retrieval of fasta records from flat file databases
Modified: trunk/packages/cdbfasta/trunk/debian/copyright
===================================================================
--- trunk/packages/cdbfasta/trunk/debian/copyright 2011-04-08 16:01:39 UTC
(rev 6489)
+++ trunk/packages/cdbfasta/trunk/debian/copyright 2011-04-08 17:23:08 UTC
(rev 6490)
@@ -1,15 +1,16 @@
This work was packaged for Debian by:
Steffen Moeller <[email protected]> on Thu, 02 Dec 2010 19:02:35 +0100
+ Tim Booth <[email protected]> on Fri Apr 8 17:18:12 BST 2011
It was downloaded from:
- <url://example.com>
+ http://sourceforge.net/projects/cdbfasta/files/
Upstream Author(s):
- <put author's name and email here>
- <likewise for another author>
+ Geo Pertea <[email protected]>
+ Gene Indices Group <[email protected]>
Copyright:
@@ -18,7 +19,7 @@
License:
- <Put the license of the package here indented by 4 spaces>
+ Unknown
The Debian packaging is:
Added:
trunk/packages/cdbfasta/trunk/debian/patches/add-install-target-to-makefile
===================================================================
--- trunk/packages/cdbfasta/trunk/debian/patches/add-install-target-to-makefile
(rev 0)
+++ trunk/packages/cdbfasta/trunk/debian/patches/add-install-target-to-makefile
2011-04-08 17:23:08 UTC (rev 6490)
@@ -0,0 +1,31 @@
+--- a/Makefile
++++ b/Makefile
+@@ -61,7 +61,7 @@
+ # LDFLAGS =
+
+ .PHONY : all
+-all: cdbfasta cdbyank
++all: cdbfasta cdbyank manpages
+ debug: all
+ nommap: all
+ cdbfasta: ./cdbfasta.o ./gcdbz.o $(LIBS) ${GCLDIR}/gcdb.o ${GCLDIR}/GBase.o
${GCLDIR}/GStr.o ${GCLDIR}/GArgs.o
+@@ -74,12 +74,17 @@
+
+ .PHONY : tidy
+ tidy::
+- @${RM} core cdbfasta cdbyank *.o ${GCLDIR}/gcdb.o ${GCLDIR}/GBase.o
${GCLDIR}/GStr.o ${GCLDIR}/GArgs.o
++ @${RM} core cdbfasta cdbyank *.o ${GCLDIR}/gcdb.o ${GCLDIR}/GBase.o
${GCLDIR}/GStr.o ${GCLDIR}/GArgs.o *.1
+
+ # target for removing all object files
+
+ .PHONY : clean
+ clean:: tidy
+- @${RM} core cdbfasta cdbyank *.o ${GCLDIR}/gcdb.o ${GCLDIR}/GBase.o
${GCLDIR}/GStr.o ${GCLDIR}/GArgs.o
++ @${RM} core cdbfasta cdbyank *.o ${GCLDIR}/gcdb.o ${GCLDIR}/GBase.o
${GCLDIR}/GStr.o ${GCLDIR}/GArgs.o *.1
+
++install : all
++ install -m 755 cdbfasta cdbyank $(DESTDIR)/usr/bin
+
++manpages : cdbfasta.1 cdbyank.1
++%.1 : %
++ help2man --no-discard-stderr --version-option=-v $< | sed 's/^Invalid
argument:.*//' > $@
Added: trunk/packages/cdbfasta/trunk/debian/patches/series
===================================================================
--- trunk/packages/cdbfasta/trunk/debian/patches/series
(rev 0)
+++ trunk/packages/cdbfasta/trunk/debian/patches/series 2011-04-08 17:23:08 UTC
(rev 6490)
@@ -0,0 +1 @@
+add-install-target-to-makefile
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