Author: alteholz-guest Date: 2011-05-30 18:05:14 +0000 (Mon, 30 May 2011) New Revision: 6895
Modified: trunk/packages/smile/trunk/debian/README.Debian trunk/packages/smile/trunk/debian/changelog trunk/packages/smile/trunk/debian/control trunk/packages/smile/trunk/debian/dirs trunk/packages/smile/trunk/debian/manpages trunk/packages/smile/trunk/debian/patches/Makefile.patch trunk/packages/smile/trunk/debian/patches/although.patch trunk/packages/smile/trunk/debian/patches/misc.patch trunk/packages/smile/trunk/debian/rules Log: as suggested by Steffen, package renamed to mlv-smile, DEP-3 header added to patches, debian/rules simplified Modified: trunk/packages/smile/trunk/debian/README.Debian =================================================================== --- trunk/packages/smile/trunk/debian/README.Debian 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/README.Debian 2011-05-30 18:05:14 UTC (rev 6895) @@ -2,7 +2,7 @@ ---------------- As there is a multimedia package with the same name, I renamed this package - to biosmile. + to mlv-smile. -- Thorsten Alteholz <[email protected]>, Wed, 18 May 2011 18:20:05 +0200 Modified: trunk/packages/smile/trunk/debian/changelog =================================================================== --- trunk/packages/smile/trunk/debian/changelog 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/changelog 2011-05-30 18:05:14 UTC (rev 6895) @@ -1,16 +1,24 @@ -biosmile (1.47-2) unstable; urgency=low +mlv-smile (1.47-2) unstable; urgency=low - * renamed package to biosmile + * renamed package to mlv-smile * Lintian clean * already prepared patches from Steffen Moeller applied * debian/source/format added * debian/compat changed to 8 * debian/copyright: new address of FSF, added version to licenses * debian/rules: errors in manpage corrected + * debian/rules: simplified + * added DEP-3 header to patches + * initial Release (Closes: #221492). + [Charles Plessy] + * debian/control: Added Vcs fields + * debian/control: Removed the [Biology] tag in the package short description + * debian/copyright: Converted the copyright file to DEP-5 format + -- Thorsten Alteholz <[email protected]> Tue, 18 May 2011 18:17:00 +0200 -biosmile (1.47-1) unstable; urgency=low +mlv-smile (1.47-1) unstable; urgency=low * New upstream release. * GPL license stated in upstream release. @@ -18,9 +26,8 @@ -- Steffen Moeller <[email protected]> Tue, 05 Apr 2004 13:17:00 +0200 -biosmile (1.46-1) unstable; urgency=low +mlv-smile (1.46-1) unstable; urgency=low - * Initial Release (Closes: #221492). * Upstream author contributed man page. -- Steffen Moeller <[email protected]> Tue, 18 Nov 2003 16:20:05 +0100 Modified: trunk/packages/smile/trunk/debian/control =================================================================== --- trunk/packages/smile/trunk/debian/control 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/control 2011-05-30 18:05:14 UTC (rev 6895) @@ -1,4 +1,4 @@ -Source: biosmile +Source: mlv-smile Section: science Priority: optional Maintainer: Debian Med Packaging Team <[email protected]> @@ -11,7 +11,7 @@ Standards-Version: 3.9.2 Homepage: http://www-igm.univ-mlv.fr/~marsan/smile_english.html -Package: biosmile +Package: mlv-smile Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, perl Description: Find statistically significant patterns in sequences Modified: trunk/packages/smile/trunk/debian/dirs =================================================================== --- trunk/packages/smile/trunk/debian/dirs 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/dirs 2011-05-30 18:05:14 UTC (rev 6895) @@ -1,4 +1,4 @@ usr/bin usr/lib -usr/lib/biosmile -usr/lib/biosmile/bin +usr/lib/mlv-smile +usr/lib/mlv-smile/bin Modified: trunk/packages/smile/trunk/debian/manpages =================================================================== --- trunk/packages/smile/trunk/debian/manpages 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/manpages 2011-05-30 18:05:14 UTC (rev 6895) @@ -1 +1 @@ -biosmile.1 +mlv-smile.1 Modified: trunk/packages/smile/trunk/debian/patches/Makefile.patch =================================================================== --- trunk/packages/smile/trunk/debian/patches/Makefile.patch 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/patches/Makefile.patch 2011-05-30 18:05:14 UTC (rev 6895) @@ -1,4 +1,6 @@ -Add install target to Makefiles +Desription: Add install target to Makefiles +Author: Steffen Moeller <[email protected]> +Last-Update: 2011-05-20 --- smile-1.47.orig/P_BLOCS/Makefile +++ smile-1.47/P_BLOCS/Makefile @@ -124,4 +124,12 @@ @@ -6,7 +8,7 @@ makedepend -o.o $(SPELL_INCL_DIR)*.h $(INCL_DIR)*.h $(SPELL_SRC_DIR)*.c $(SRC_DIR)*.c -I$(INCL_DIR) -I$(SPELL_INCL_DIR) +DESTDIR="" -+DESTLIBDIR=$(DESTDIR)/usr/lib/biosmile/ ++DESTLIBDIR=$(DESTDIR)/usr/lib/mlv-smile/ + +install: all + -mkdir -p $(DESTLIBDIR)/bin @@ -48,7 +50,7 @@ + $(MAKE) -C $(P_DIR) install + $(MAKE) -C $(PD_DIR) install + $(MAKE) -C $(S_DIR) install -+ cp Lanceur/smile $(DESTDIR)/usr/bin/biosmile ++ cp Lanceur/smile $(DESTDIR)/usr/bin/mlv-smile --- smile-1.47.orig/P_BLOCS+DELTA/Makefile +++ smile-1.47/P_BLOCS+DELTA/Makefile @@ -124,4 +124,12 @@ @@ -56,7 +58,7 @@ makedepend -o.o $(SPELL_INCL_DIR)*.h $(INCL_DIR)*.h $(SPELL_SRC_DIR)*.c $(SRC_DIR)*.c -I$(INCL_DIR) -I$(SPELL_INCL_DIR) +DESTDIR="" -+DESTLIBDIR=$(DESTDIR)/usr/lib/biosmile/ ++DESTLIBDIR=$(DESTDIR)/usr/lib/mlv-smile/ + +install: all + -mkdir -p $(DESTLIBDIR)/bin @@ -89,7 +91,7 @@ tar -zcvf $(ARCHIVE_NAME) ./* +DESTDIR="" -+DESTLIBDIR=$(DESTDIR)/usr/lib/biosmile/ ++DESTLIBDIR=$(DESTDIR)/usr/lib/mlv-smile/ + +install: all + -mkdir -p $(DESTLIBDIR)/bin @@ -112,7 +114,7 @@ makedepend -o.o $(SPELL_INCL_DIR)*.h $(INCL_DIR)*.h $(SPELL_SRC_DIR)*.c $(SRC_DIR)*.c -I$(INCL_DIR) -I$(SPELL_INCL_DIR) + +DESTDIR="" -+DESTLIBDIR=$(DESTDIR)/usr/lib/biosmile/ ++DESTLIBDIR=$(DESTDIR)/usr/lib/mlv-smile/ + +install: obj + #-mkdir -p $(DESTLIBDIR)/bin Modified: trunk/packages/smile/trunk/debian/patches/although.patch =================================================================== --- trunk/packages/smile/trunk/debian/patches/although.patch 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/patches/although.patch 2011-05-30 18:05:14 UTC (rev 6895) @@ -1,4 +1,6 @@ -Spelling error altough -> although +Desription: Spelling error altough -> although +Author: Thorsten Alteholz <[email protected]> +Last-Update: 2011-05-20 --- smile-1.47.orig/SigStat/src/io.c 2011-05-16 18:18:45.000000000 +0200 +++ smile-1.47/SigStat/src/io.c 2011-05-16 18:20:30.000000000 +0200 @@ -132,7 +132,7 @@ Modified: trunk/packages/smile/trunk/debian/patches/misc.patch =================================================================== --- trunk/packages/smile/trunk/debian/patches/misc.patch 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/patches/misc.patch 2011-05-30 18:05:14 UTC (rev 6895) @@ -1,4 +1,6 @@ -Different patches for Debian. +Desription: Different patches for Debian. +Author: Steffen Moeller <[email protected]> +Last-Update: 2011-05-20 --- smile-1.47.orig/P_BLOCS/src/allocateurs.c +++ smile-1.47/P_BLOCS/src/allocateurs.c @@ -17,6 +17,7 @@ @@ -21,8 +23,8 @@ -$progfaux = "../SigStat/bin/e-smile_against"; + +my $prefix=".."; -+if ( -x "/usr/lib/biosmile/bin") { -+ $prefix="/usr/lib/biosmile/bin"; ++if ( -x "/usr/lib/mlv-smile/bin") { ++ $prefix="/usr/lib/mlv-smile/bin"; + $prog1 = "$prefix/x-smile"; + $prog2 = "$prefix/x-smile_delta"; + $progstat = "$prefix/e-smile_shuffling"; Modified: trunk/packages/smile/trunk/debian/rules =================================================================== --- trunk/packages/smile/trunk/debian/rules 2011-05-30 17:40:39 UTC (rev 6894) +++ trunk/packages/smile/trunk/debian/rules 2011-05-30 18:05:14 UTC (rev 6895) @@ -1,90 +1,18 @@ #!/usr/bin/make -f -# -*- makefile -*- -# Sample debian/rules that uses debhelper. -# GNU copyright 1997 to 1999 by Joey Hess. +# debian/rules file for smile +# Thorsten Alteholz <[email protected]> +# GPL -# Uncomment this to turn on verbose mode. -#export DH_VERBOSE=1 +%: + dh $@ - - - -CFLAGS = -Wall -g - -ifneq (,$(findstring noopt,$(DEB_BUILD_OPTIONS))) - CFLAGS += -O0 -else - CFLAGS += -O2 -endif -ifeq (,$(findstring nostrip,$(DEB_BUILD_OPTIONS))) - INSTALL_PROGRAM += -s -endif - -configure: configure-stamp -configure-stamp: - dh_testdir - # Add here commands to configure the package. - - touch configure-stamp - - -build: build-stamp - -build-stamp: configure-stamp - dh_testdir - - # Add here commands to compile the package. - $(MAKE) - # some spellings in compressed man page corrected +override_dh_auto_install: zcat smile.1.gz |sed "s/\.\.\.which/which/g"|\ - sed "s/allows to/allows one to/g"|\ - sed "s/algorithmical/algorithmically/g"|\ - sed "s/smile \-g/smile \\\-g/g"|\ - sed "s/smile/biosmile/g"|\ - sed "s/Smile/Biosmile/g" > biosmile.1 - - touch build-stamp - -clean: - dh_testdir - dh_testroot - rm -f build-stamp configure-stamp - -rm -r $(CURDIR)/debian/biosmile - - # Add here commands to clean up after the build process. - [ ! -f Makefile ] || $(MAKE) clean - dh_clean biosmile.1 - -install: build - dh_testdir - dh_testroot - dh_prep - dh_installdirs - - # Add here commands to install the package into debian/biosmile. - $(MAKE) install DESTDIR=$(CURDIR)/debian/biosmile - -# Build architecture-independent files here. -binary-indep: build install -# We have nothing to do by default. - -# Build architecture-dependent files here. -binary-arch: build install - dh_testdir - dh_testroot + sed "s/allows to/allows one to/g"|\ + sed "s/algorithmical/algorithmically/g"|\ + sed "s/smile \-g/smile \\\-g/g"|\ + sed "s/smile/mlv-smile/g"|\ + sed "s/Smile/mlv-smile/g" > mlv-smile.1 dh_installchangelogs READ_ME - dh_installdocs - dh_installexamples - dh_installman - dh_link - dh_strip - dh_compress - dh_fixperms - dh_installdeb - dh_shlibdeps - dh_gencontrol - dh_md5sums - dh_builddeb + dh_auto_install -binary: binary-indep binary-arch -.PHONY: build clean binary-indep binary-arch binary install configure _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
