Author: plessy Date: 2011-07-25 10:21:00 +0000 (Mon, 25 Jul 2011) New Revision: 7328
Modified: trunk/packages/seaview/trunk/debian/changelog trunk/packages/seaview/trunk/debian/control trunk/packages/seaview/trunk/debian/copyright trunk/packages/seaview/trunk/debian/rules Log: New usptream release, with no new copyright notice or license statement. * Built on FLTK 1.3 (enables SVG output). * Corrected location of the help file. * Build-depend on Xinerama. Modified: trunk/packages/seaview/trunk/debian/changelog =================================================================== --- trunk/packages/seaview/trunk/debian/changelog 2011-07-25 09:34:34 UTC (rev 7327) +++ trunk/packages/seaview/trunk/debian/changelog 2011-07-25 10:21:00 UTC (rev 7328) @@ -1,3 +1,11 @@ +seaview (1:4.3.0-1) unstable; urgency=low + + * New upstream version with SVG output. + * Built on FLTK 1.3 (debian/control). + * Corrected location of the help file (debian/rules). + + -- Charles Plessy <[email protected]> Mon, 25 Jul 2011 18:57:42 +0900 + seaview (1:4.2.12-1) unstable; urgency=low * New upstream versions. Modified: trunk/packages/seaview/trunk/debian/control =================================================================== --- trunk/packages/seaview/trunk/debian/control 2011-07-25 09:34:34 UTC (rev 7327) +++ trunk/packages/seaview/trunk/debian/control 2011-07-25 10:21:00 UTC (rev 7328) @@ -5,8 +5,8 @@ DM-Upload-Allowed: yes Uploaders: Charles Plessy <[email protected]>, Andreas Tille <[email protected]> -Build-Depends: cdbs, debhelper ( >= 8 ), libfltk1.1-dev, libjpeg-dev, libpng12-dev, - libxft-dev, libxext-dev, zlib1g-dev +Build-Depends: cdbs, debhelper ( >= 8 ), libfltk1.3-dev, libjpeg-dev, libpng12-dev, + libxft-dev, libxext-dev, libxinerama-dev, zlib1g-dev Standards-Version: 3.9.2 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/seaview/trunk/?rev=0&sc=0 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/seaview/trunk/ @@ -21,10 +21,10 @@ SeaView reads and writes various file formats (NEXUS, MSF, CLUSTAL, FASTA, PHYLIP, MASE, Newick) of DNA and protein sequences and of phylogenetic trees. Alignments can be manually edited. It drives the programs Muscle or Clustal W - for multiple sequence alignment, and also allows to use any external alignment - algorithm able to read and write FASTA-formatted files. It computes + for multiple sequence alignment, and also allows one to use any external + alignment algorithm able to read and write FASTA-formatted files. It computes phylogenetic trees by parsimony using PHYLIP's dnapars/protpars algorithm, by distance with NJ or BioNJ algorithms on a variety of evolutionary distances, or by maximum likelihood using the program PhyML 3.0. SeaView draws phylogenetic - trees on screen or PostScript files, and allows to download sequences from + trees on screen or PostScript files, and allows one to download sequences from EMBL/GenBank/UniProt using the Internet. Modified: trunk/packages/seaview/trunk/debian/copyright =================================================================== --- trunk/packages/seaview/trunk/debian/copyright 2011-07-25 09:34:34 UTC (rev 7327) +++ trunk/packages/seaview/trunk/debian/copyright 2011-07-25 10:21:00 UTC (rev 7328) @@ -1,5 +1,5 @@ Format: http://dep.debian.net/deps/dep5/ -Source: ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.2.12.tar.gz +Source: ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.0.tar.gz Disclamer: This package is not part of the Debian operating system. The seaview source and binary Debian packages are part of the “non-free” area in our archive. The packages in this area are not part of the Debian system, Modified: trunk/packages/seaview/trunk/debian/rules =================================================================== --- trunk/packages/seaview/trunk/debian/rules 2011-07-25 09:34:34 UTC (rev 7327) +++ trunk/packages/seaview/trunk/debian/rules 2011-07-25 10:21:00 UTC (rev 7328) @@ -10,4 +10,4 @@ CFLAGS += -Wl,--as-needed # Debian-specific names and paths -CFLAGS += -DDEFAULT_HELPFILE=\\\"/usr/share/seaview/seaview.html\\\" -DPHYMLNAME=\\\"phyml\\\" +CFLAGS += -DDEFAULT_HELPFILE=\\\"/usr/share/doc/seaview/seaview.html\\\" -DPHYMLNAME=\\\"phyml\\\" _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
