Author: moeller
Date: 2011-08-25 19:24:35 +0000 (Thu, 25 Aug 2011)
New Revision: 7545
Added:
trunk/packages/rostlab/disulfinder/trunk/debian/disulfinder-data.dirs
trunk/packages/rostlab/disulfinder/trunk/debian/examples
Modified:
trunk/packages/rostlab/disulfinder/trunk/debian/changelog
trunk/packages/rostlab/disulfinder/trunk/debian/control
trunk/packages/rostlab/disulfinder/trunk/debian/rules
Log:
Seems to work.
Modified: trunk/packages/rostlab/disulfinder/trunk/debian/changelog
===================================================================
--- trunk/packages/rostlab/disulfinder/trunk/debian/changelog 2011-08-25
04:21:19 UTC (rev 7544)
+++ trunk/packages/rostlab/disulfinder/trunk/debian/changelog 2011-08-25
19:24:35 UTC (rev 7545)
@@ -1,9 +1,12 @@
-disulfinder (1.2.10-1) UNRELEASED; urgency=low
+disulfinder (1.2.10-1) unstable; urgency=low
* New upstream release
* The new upstream contains a rewritten version of require.h: the new
require.h is no longer based on any code with restricted license,
it is released under the GPL (see source)
+ [Steffen
+ * moved to dh7
+ * added data package
-- Laszlo Kajan <[email protected]> Thu, 18 Aug 2011 11:28:02 +0200
@@ -16,6 +19,6 @@
disulfinder (1.2.9-1) unstable; urgency=low
- * Initial release (Closes: #634177).
+ * Initial release (Closes: #634177)
-- Laszlo Kajan <[email protected]> Sat, 09 Jul 2011 11:54:46 +0200
Modified: trunk/packages/rostlab/disulfinder/trunk/debian/control
===================================================================
--- trunk/packages/rostlab/disulfinder/trunk/debian/control 2011-08-25
04:21:19 UTC (rev 7544)
+++ trunk/packages/rostlab/disulfinder/trunk/debian/control 2011-08-25
19:24:35 UTC (rev 7545)
@@ -12,7 +12,7 @@
Package: disulfinder
Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}
+Depends: ${shlibs:Depends}, ${misc:Depends}, disulfinder-data
Description: cysteines disulfide bonding state and connectivity predictor
'disulfinder' is for predicting the disulfide bonding state of cysteines
and their disulfide connectivity starting from sequence alone. Disulfide
@@ -28,3 +28,14 @@
BRNN-SVM binary classifier; (2) cysteines that are known to participate
in the formation of bridges are paired by a Recursive Neural Network
to obtain a connectivity pattern.
+
+Package: disulfinder-data
+Architecture: all
+Depends: ${misc:Depends}
+Description: data files for predictor of disulfide bonds in proteins
+ 'disulfinder' is for predicting the disulfide bonding state of cysteines
+ and their disulfide connectivity starting from sequence alone.
+ .
+ This package contains all data files to reduce the redundancy between
+ architectures in Debian.
+
Added: trunk/packages/rostlab/disulfinder/trunk/debian/disulfinder-data.dirs
===================================================================
--- trunk/packages/rostlab/disulfinder/trunk/debian/disulfinder-data.dirs
(rev 0)
+++ trunk/packages/rostlab/disulfinder/trunk/debian/disulfinder-data.dirs
2011-08-25 19:24:35 UTC (rev 7545)
@@ -0,0 +1 @@
+usr/share/disulfinder
Added: trunk/packages/rostlab/disulfinder/trunk/debian/examples
===================================================================
--- trunk/packages/rostlab/disulfinder/trunk/debian/examples
(rev 0)
+++ trunk/packages/rostlab/disulfinder/trunk/debian/examples 2011-08-25
19:24:35 UTC (rev 7545)
@@ -0,0 +1 @@
+example
Modified: trunk/packages/rostlab/disulfinder/trunk/debian/rules
===================================================================
--- trunk/packages/rostlab/disulfinder/trunk/debian/rules 2011-08-25
04:21:19 UTC (rev 7544)
+++ trunk/packages/rostlab/disulfinder/trunk/debian/rules 2011-08-25
19:24:35 UTC (rev 7545)
@@ -1,14 +1,11 @@
#!/usr/bin/make -f
# -*- makefile -*-
-# Sample debian/rules that uses debhelper.
-# This file was originally written by Joey Hess and Craig Small.
-# As a special exception, when this file is copied by dh-make into a
-# dh-make output file, you may use that output file without restriction.
-# This special exception was added by Craig Small in version 0.37 of dh-make.
# Uncomment this to turn on verbose mode.
-#export DH_VERBOSE=1
+export DH_VERBOSE=1
+%:
+ dh $@
build-indep:
echo "Nothing to do for build-indep"
@@ -16,70 +13,14 @@
build build-arch: build-stamp
build-stamp:
dh_testdir
-
- # Add here commands to compile the package.
$(MAKE) prefix=/usr
#docbook-to-man debian/disulfinder.sgml > disulfinder.1
-
touch $@
-clean:
+override_dh_install: build
dh_testdir
dh_testroot
- rm -f build-stamp
-
- # Add here commands to clean up after the build process.
- $(MAKE) distclean
-
- dh_clean
-
-install: build
- dh_testdir
- dh_testroot
dh_prep
dh_installdirs
-
- # Add here commands to install the package into debian/disulfinder.
$(MAKE) DESTDIR=$(CURDIR)/debian/disulfinder prefix=/usr install
-
-
-# Build architecture-independent files here.
-binary-indep: build install
-# We have nothing to do by default.
-
-# Build architecture-dependent files here.
-binary-arch: build install
- dh_testdir
- dh_testroot
- dh_installchangelogs
- dh_installdocs
- dh_installexamples
-# dh_install
-# dh_python
- dh_installman
- dh_link
- dh_strip
- dh_compress
- dh_fixperms
- dh_installdeb
- dh_shlibdeps
- dh_gencontrol
- dh_md5sums
- dh_builddeb
-
-binary: binary-indep binary-arch
-.PHONY: build clean binary-indep binary-arch binary install configure
-
-#get-orig-source:
-# V=`dpkg-parsechangelog | grep Version | cut -f2 -d\ | cut -f1 -d- | tr
-d "\n"` ; \
-# rm -f ../disulfinder_$$VERSION.orig.tar.gz ../disulfinder-$$V.tar.gz ; \
-# uscan --force-download --verbose --download-current-version ; \
-# cd .. && tar xzvf disulfinder_$$V.orig.tar.gz ; \
-# if [ ! -r disulfinder-$$V/disulfind.tgz ]; then \
-# echo "orig.tar.gz can stay as it is." ; \
-# else \
-# disulfinder_$$V.orig.tar.gz ; \
-# rm disulfinder-$$V/disulfind.tgz ; \
-# GZIP="--best --no-name" tar czvf disulfinder_$$V.orig.tar.gz
disulfinder-$$V ; \
-# fi ; \
-# #rm -r disulfinder-$$V
+ mv debian/disulfinder/usr/share/disulfinder/Models
debian/disulfinder-data/usr/share/disulfinder/
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