Author: ivomaintz-guest
Date: 2012-01-31 16:05:36 +0000 (Tue, 31 Jan 2012)
New Revision: 9502

Added:
   trunk/packages/libsbml/branches/libsbml4/
   trunk/packages/libsbml/branches/libsbml4/debian/
   trunk/packages/libsbml/branches/libsbml4/debian/README.Debian-source
   trunk/packages/libsbml/branches/libsbml4/debian/changelog
   trunk/packages/libsbml/branches/libsbml4/debian/compat
   trunk/packages/libsbml/branches/libsbml4/debian/control
   trunk/packages/libsbml/branches/libsbml4/debian/control.in
   trunk/packages/libsbml/branches/libsbml4/debian/copyright
   trunk/packages/libsbml/branches/libsbml4/debian/dirs
   trunk/packages/libsbml/branches/libsbml4/debian/docs
   trunk/packages/libsbml/branches/libsbml4/debian/etc/
   trunk/packages/libsbml/branches/libsbml4/debian/etc/csh/
   trunk/packages/libsbml/branches/libsbml4/debian/etc/csh/login.d/
   
trunk/packages/libsbml/branches/libsbml4/debian/etc/csh/login.d/libsbml-matlab.csh
   trunk/packages/libsbml/branches/libsbml4/debian/etc/profile.d/
   
trunk/packages/libsbml/branches/libsbml4/debian/etc/profile.d/libsbml-matlab.sh
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-dev.install
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-doc.docs
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-doc.links
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-examples.docs
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-examples.examples
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.docs
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.install
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.postinst
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.postrm
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab-doc.docs
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab-doc.links
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab.install
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave-doc.docs
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave-doc.links
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave.install
   
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave.lintian-overrides
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl-doc.docs
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl-doc.links
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl.install
   
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl.lintian-overrides
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python-doc.docs
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python-doc.links
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python.docs
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python.install
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-ruby1.8.install
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.install
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.postinst
   trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.postrm
   trunk/packages/libsbml/branches/libsbml4/debian/lintian/
   trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-java
   trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-matlab
   trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-octave
   trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-perl
   trunk/packages/libsbml/branches/libsbml4/debian/rules
   trunk/packages/libsbml/branches/libsbml4/debian/source/
   trunk/packages/libsbml/branches/libsbml4/debian/source/format
   trunk/packages/libsbml/branches/libsbml4/debian/watch
Log:
first commit of the libsbml4



Added: trunk/packages/libsbml/branches/libsbml4/debian/README.Debian-source
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/README.Debian-source        
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/README.Debian-source        
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,6 @@
+The build process is overly sensitive to the version of doxygen used
+       docTree.patch  - do not depend on doxygen's tree.html file
+and the Java documentation is basically not buildable, which is why
+we have decided to just not build it.
+       uncommentJava.patch - do not build Java documentation
+

Added: trunk/packages/libsbml/branches/libsbml4/debian/changelog
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/changelog                   
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/changelog   2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1,23 @@
+libsbml (4.3.1-1) unstable; urgency=low
+
+  * Upstream update
+
+ -- Ivo Maintz <[email protected]>  Fri, 07 Oct 2011 17:52:28 +0200
+
+libsbml (3.4.0-1) UNRELEASED; urgency=low
+
+  * Upstream update.
+
+ -- Moriyoshi Koizumi <[email protected]>  Tue, 16 Jun 2009 19:42:00 +0900
+
+libsbml (3.3.2-1) UNRELEASED; urgency=low
+
+  * Upstream update.
+
+ -- Moriyoshi Koizumi <[email protected]>  Wed, 03 Jun 2009 02:30:07 +0900
+
+libsbml (3.3.1-1) UNRELEASED; urgency=low
+
+  * Initial release (Closes: #241111)
+
+ -- David Paleino <[email protected]>  Tue, 10 Feb 2009 14:36:09 +0100

Added: trunk/packages/libsbml/branches/libsbml4/debian/compat
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/compat                      
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/compat      2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+7

Added: trunk/packages/libsbml/branches/libsbml4/debian/control
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/control                     
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/control     2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1,166 @@
+Source: libsbml
+Priority: optional
+Maintainer: Debian Med Packaging Team 
<[email protected]>
+Uploaders: Ivo Maintz <[email protected]>,
+ Changyan Xie <[email protected]>,
+ Moriyoshi Koizumi <[email protected]>,
+DM-Upload-Allowed: yes
+Build-Depends: debhelper (>= 7),
+ autoconf,
+ automake,
+ cli-common-dev,
+ cli-runtime,
+ c-sharp-compiler,
+ default-jdk | openjdk-6-jdk | java-gcj-compat-dev | java-sdk,
+ doxygen (>= 1.5.8),
+ graphviz,
+ libperl-dev,
+ libxml2-dev,
+ libbz2-dev,
+ octave-pkg-dev,
+ perl,
+ python-dev,
+ python-support,
+ ruby1.8,
+ ruby1.8-dev,
+ swig (>= 2),
+ zlib1g-dev,
+Standards-Version: 3.9.2
+Section: science
+Vcs-Browser: 
http://svn.debian.org/wsvn/debian-med/trunk/packages/libsbml/trunk/
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/libsbml
+
+Package: libsbml4-dev
+Section: libdevel
+Provides: libsbml-dev
+Conflicts: libsbml3-dev
+Architecture: any
+Suggests: libsbml4-doc
+Depends: libsbml4 (= ${binary:Version}),
+ ${misc:Depends}
+Description: System Biology Markup Language library - development files
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains files necessary for development with libsbml.
+
+Package: libsbml4-dbg
+Section: debug
+Priority: extra
+Provides: libsbml-dbg
+Conflicts: libsbml3-dbg
+Architecture: any
+Depends: libsbml4 (= ${binary:Version}),
+ ${misc:Depends}
+Description: System Biology Markup Language library - debug symbols
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains th debugging symbols for libsbml.
+
+Package: libsbml4
+Section: libs
+Architecture: any
+Provides: libsbml
+Conflicts: libsbml1, libsbml2, libsbml3
+Suggests: libsbml4-doc
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
+Description: System Biology Markup Language library
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+
+Package: libsbml4-python
+Section: python
+Provides: ${python:Provides},
+ python-sbml,
+ libsbml-python
+Conflicts: python-sbml3
+Architecture: any
+Suggests: libsbml4-python-doc
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ ${python:Depends}
+Description: System Biology Markup Language library - Python bindings
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains the Python bindings of LibSBML.
+
+
+Package: libsbml4-ruby1.8
+Section: ruby
+Provides: libsbml-ruby
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
+Description: System Biology Markup Language library - Ruby binding
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains the Ruby binding of LibSBML.
+
+Package: libsbml4-java
+Section: java
+Provides: libsbml-java
+Conflicts: libsbml3-java
+Architecture: any
+Suggests: libsbml4-java-doc
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
+Description: System Biology Markup Language library - Java binding
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This Package contains the Java binding of LibSBML.
+
+Package: libsbml4-perl
+Section: perl
+Provides: libsbml-perl
+Conflicts: libsbml3-perl
+Suggests: libsbml4-perl-doc
+Depends: ${shlibs:Depends},
+ ${perl:Depends},
+ ${misc:Depends}
+Architecture: any
+Description: System Biology Markup Language library - Perl binding
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains the Perl binding of LibSBML.
+
+Package: libsbml4-octave
+Section: math
+Provides: libsbml-octave
+Suggests: libsbml4-octave-doc
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ octave3.2,
+ libc6 (>=2.4)
+Architecture: any
+Description: System Biology Markup Language library - Octave binding
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains the Octave binding of LibSBML.
+
+Package: libsbml4-examples
+Section: doc
+Architecture: all
+Depends: ${misc:Depends}
+Suggests: libsbml4-dev
+Description: System Biology Markup Language library -- example files
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains C/C++, Java, Perl and layout examples.

Added: trunk/packages/libsbml/branches/libsbml4/debian/control.in
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/control.in                  
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/control.in  2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1,180 @@
+Source: libsbml
+Priority: optional
+Maintainer: Debian Med Packaging Team 
<[email protected]>
+Uploaders: Ivo Maintz <[email protected]>,
+ Changyan Xie <[email protected]>,
+ Moriyoshi Koizumi <[email protected]>,
+DM-Upload-Allowed: yes
+Build-Depends: debhelper (>= 7),
+ autoconf,
+ automake,
+ cli-common-dev,
+ cli-runtime,
+ c-sharp-compiler,
+ default-jdk | openjdk-6-jdk | java-gcj-compat-dev | java-sdk,
+ doxygen (>= 1.5.8),
+ graphviz,
+ libperl-dev,
+ libxml2-dev,
+ libbz2-dev,
+ octave-pkg-dev,
+ perl,
+ python-dev,
+ python-support,
+ ruby1.8,
+ ruby1.8-dev,
+ swig (>= 2),
+ zlib1g-dev,
+Standards-Version: 3.9.2
+Section: science
+Vcs-Browser: 
http://svn.debian.org/wsvn/debian-med/trunk/packages/libsbml/trunk/
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/libsbml
+
+Package: libsbml4-dev
+Section: libdevel
+Provides: libsbml-dev
+Conflicts: libsbml3-dev
+Architecture: any
+Suggests: libsbml4-doc
+Depends: libsbml4 (= ${binary:Version}),
+ ${misc:Depends}
+Description: System Biology Markup Language library - development files
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains files necessary for development with libsbml.
+
+Package: libsbml4-dbg
+Section: debug
+Priority: extra
+Provides: libsbml-dbg
+Conflicts: libsbml3-dbg
+Architecture: any
+Depends: libsbml4 (= ${binary:Version}),
+ ${misc:Depends}
+Description: System Biology Markup Language library - debug symbols
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains th debugging symbols for libsbml.
+
+Package: libsbml4
+Section: libs
+Architecture: any
+Provides: libsbml
+Conflicts: libsbml1, libsbml2, libsbml3
+Suggests: libsbml4-doc
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
+Description: System Biology Markup Language library
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+
+Package: libsbml4-python
+Section: python
+Provides: ${python:Provides},
+ python-sbml,
+ libsbml-python
+Conflicts: python-sbml3
+Architecture: any
+Suggests: libsbml4-python-doc
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ ${python:Depends}
+Description: System Biology Markup Language library - Python bindings
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains the Python bindings of LibSBML.
+
+#Package: libsbml4-matlab
+#Section: non-free/math
+#Provides: libsbml-matlab
+#Architecture: amd64
+#Suggests: libsbml4-matlab-doc
+#Depends: ${shlibs:Depends}, ${misc:Depends},
+# libsbml4,
+# libc6 (>= 2.3)
+#Description: System Biology Markup Language library - Matlab bindings
+# LibSBML is a library designed to help you read, write, manipulate,
+# translate, and validate SBML files and data streams. It is not an
+# application itself (though it does come with many example programs),
+# but rather a library you can embed in your own applications.
+# This package contains the Matlab bindings of LibSBML.
+
+Package: libsbml4-ruby1.8
+Section: ruby
+Provides: libsbml-ruby
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
+Description: System Biology Markup Language library - Ruby binding
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains the Ruby binding of LibSBML.
+
+Package: libsbml4-java
+Section: java
+Provides: libsbml-java
+Conflicts: libsbml3-java
+Architecture: any
+Suggests: libsbml4-java-doc
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
+Description: System Biology Markup Language library - Java binding
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This Package contains the Java binding of LibSBML.
+
+Package: libsbml4-perl
+Section: perl
+Provides: libsbml-perl
+Conflicts: libsbml3-perl
+Suggests: libsbml4-perl-doc
+Depends: ${shlibs:Depends},
+ ${perl:Depends},
+ ${misc:Depends}
+Architecture: any
+Description: System Biology Markup Language library - Perl binding
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains the Perl binding of LibSBML.
+
+Package: libsbml4-octave
+Section: math
+Provides: libsbml-octave
+Suggests: libsbml4-octave-doc
+Depends: ${shlibs:Depends},
+ ${misc:Depends},
+ octave3.2,
+ libc6 (>=2.4)
+Architecture: any
+Description: System Biology Markup Language library - Octave binding
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains the Octave binding of LibSBML.
+
+Package: libsbml4-examples
+Section: doc
+Architecture: all
+Depends: ${misc:Depends}
+Suggests: libsbml4-dev
+Description: System Biology Markup Language library -- example files
+ LibSBML is a library designed to help you read, write, manipulate,
+ translate, and validate SBML files and data streams. It is not an
+ application itself (though it does come with many example programs),
+ but rather a library you can embed in your own applications.
+ This package contains C/C++, Java, Perl and layout examples.

Added: trunk/packages/libsbml/branches/libsbml4/debian/copyright
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/copyright                   
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/copyright   2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1,30 @@
+This package was debianized by Changyan Xie <[email protected]> on
+Mon, 22 Jan 2007 05:20:36 +0000.
+Modified by Ivo Maintz <[email protected]> on
+Wed, 21 Sep 2011 09:31:16
+
+It was downloaded from http://www.sbml.org/software/libsbml/
+
+Upstream Author: Ben Bornstein with contributions from
+        Ben Kovitz, Stefan Hoops, Sarah Keating, Mike Hucka,
+        Martin Ginkel, Christoph Flamm, Rainer Machne,
+        and many others in the SBML community.
+
+        mailto:[email protected]
+
+Copyright: SBML-TEAM (2005), the sponsors are listed below,such as:
+
+the National Institutes of Health (USA); the International
+Joint Research Program of NEDO (Japan); the JST ERATO-SORST Program
+(Japan); the Japanese Ministry of Agriculture; the Japanese Ministry of
+Education, Culture, Sports, Science and Technology; the BBSRC e-Science
+Initiative (UK); the DARPA IPTO Bio-Computation Program (USA); the Army
+Research Office's Institute for Collaborative Biotechnologies (USA); the
+Air Force Office of Scientific Research (USA); the California Institute of
+Technology (USA); the University of Hertfordshire (UK); the Molecular
+Sciences Institute (USA); and the Systems Biology Institute (Japan).
+
+License: LGPL
+
+The Debian packaging is (C) 2007, Changyan Xie <[email protected]> and
+is licensed under the GPL, see `/usr/share/common-licenses/GPL'.

Added: trunk/packages/libsbml/branches/libsbml4/debian/dirs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/dirs                        
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/dirs        2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1,3 @@
+usr/share/java
+usr/lib/jni
+usr/share/man

Added: trunk/packages/libsbml/branches/libsbml4/debian/docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/docs                        
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/docs        2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1,7 @@
+AUTHORS.txt
+FUNDING.txt
+NEWS.txt
+README.txt
+README.txt
+VERSION.txt
+debian/README.Debian-source

Added: 
trunk/packages/libsbml/branches/libsbml4/debian/etc/csh/login.d/libsbml-matlab.csh
===================================================================
--- 
trunk/packages/libsbml/branches/libsbml4/debian/etc/csh/login.d/libsbml-matlab.csh
                          (rev 0)
+++ 
trunk/packages/libsbml/branches/libsbml4/debian/etc/csh/login.d/libsbml-matlab.csh
  2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,3 @@
+setenv | grep MATLABPATH | grep /usr/lib: >& /dev/null && exit
+setenv | grep MATLABPATH >& /dev/null && setenv MATLABPATH 
/usr/lib:$MATLABPATH && exit
+setenv MATLABPATH /usr/lib

Added: 
trunk/packages/libsbml/branches/libsbml4/debian/etc/profile.d/libsbml-matlab.sh
===================================================================
--- 
trunk/packages/libsbml/branches/libsbml4/debian/etc/profile.d/libsbml-matlab.sh 
                            (rev 0)
+++ 
trunk/packages/libsbml/branches/libsbml4/debian/etc/profile.d/libsbml-matlab.sh 
    2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+echo $MATLABPATH | grep /usr/lib: || export MATLABPATH=/usr/lib:$MATLABPATH

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-dev.install
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-dev.install        
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-dev.install        
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,5 @@
+usr/include/sbml/*
+usr/lib/libsbml.a
+usr/lib/libsbml.la
+usr/lib/libsbml.so
+usr/lib/pkgconfig/libsbml.pc

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-doc.docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-doc.docs           
                (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-doc.docs   
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,2 @@
+debian/tmp/usr/share/doc/libsbml-*/c-api
+debian/tmp/usr/share/doc/libsbml-*/cpp-api

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-doc.links
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-doc.links          
                (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-doc.links  
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,2 @@
+/usr/share/javascript/jquery/jquery.js 
/usr/share/doc/libsbml4-doc/c-api/jquery.js
+/usr/share/javascript/jquery/jquery.js 
/usr/share/doc/libsbml4-doc/cpp-api/jquery.js

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-examples.docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-examples.docs      
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-examples.docs      
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+examples/README.txt

Added: 
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-examples.examples
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-examples.examples  
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-examples.examples  
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+examples/*

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.docs          
                (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.docs  
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+debian/tmp/usr/share/doc/libsbml-*/java.txt

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.install
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.install       
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.install       
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,3 @@
+usr/lib/libsbmlj.so
+usr/share/java/libsbmlj.jar
+../lintian/libsbml4-java usr/share/lintian/overrides

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.postinst
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.postinst      
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.postinst      
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,27 @@
+#!/bin/sh
+# postinst script for libsbml-java
+#
+# see: dh_installdeb(1)
+
+set -e
+
+case "$1" in
+    configure)
+    ldconfig /usr/lib/libsbmlj.so
+    ;;
+
+    abort-upgrade|abort-remove|abort-deconfigure)
+    ;;
+
+    *)
+        echo "postinst called with unknown argument \`$1'" >&2
+        exit 1
+    ;;
+esac
+
+# dh_installdeb will replace this with shell code automatically
+# generated by other debhelper scripts.
+
+#DEBHELPER#
+
+exit 0

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.postrm
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.postrm        
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-java.postrm        
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,24 @@
+#!/bin/sh
+# postrm script for libsbml-java
+#
+# see: dh_installdeb(1)
+
+set -e
+
+case "$1" in
+    purge|remove|upgrade|failed-upgrade|abort-install|abort-upgrade|disappear)
+    ldconfig
+    ;;
+
+    *)
+        echo "postrm called with unknown argument \`$1'" >&2
+        exit 1
+    ;;
+esac
+
+# dh_installdeb will replace this with shell code automatically
+# generated by other debhelper scripts.
+
+#DEBHELPER#
+
+exit 0

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab-doc.docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab-doc.docs    
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab-doc.docs    
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+debian/tmp/usr/share/doc/libsbml-*/matlab-api

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab-doc.links
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab-doc.links   
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab-doc.links   
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+/usr/share/javascript/jquery/jquery.js 
/usr/share/doc/libsbml4-matlab-doc/matlab-api/jquery.js

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab.install
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab.install     
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-matlab.install     
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,6 @@
+usr/lib/TranslateSBML*
+usr/lib/OutputSBML*
+usr/lib/*.m
+etc/profile.d/libsbml-matlab.sh
+etc/csh/login.d/libsbml-matlab.csh
+../lintian/libsbml4-matlab usr/share/lintian/overrides

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave-doc.docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave-doc.docs    
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave-doc.docs    
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+debian/tmp/usr/share/doc/libsbml-*/octave-api

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave-doc.links
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave-doc.links   
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave-doc.links   
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+/usr/share/javascript/jquery/jquery.js 
/usr/share/doc/libsbml4-octave-doc/octave-api/jquery.js

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave.install
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave.install     
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave.install     
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,2 @@
+usr/lib/octave/*
+../lintian/libsbml4-octave usr/share/lintian/overrides

Added: 
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave.lintian-overrides
===================================================================
--- 
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave.lintian-overrides
                           (rev 0)
+++ 
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-octave.lintian-overrides
   2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,3 @@
+libsbml5-octave binary: unstripped-binary-or-object 
./usr/lib/octave/site/oct/x86_64-pc-linux-gnu/OutputSBML.mex
+libsbml5-octave binary: unstripped-binary-or-object 
./usr/lib/octave/site/oct/x86_64-pc-linux-gnu/TranslateSBML.mex
+libsbml4-octave binary: package-depends-on-hardcoded-libc

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl-doc.docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl-doc.docs      
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl-doc.docs      
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+debian/tmp/usr/share/doc/libsbml-*/perl-api

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl-doc.links
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl-doc.links     
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl-doc.links     
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+/usr/share/javascript/jquery/jquery.js 
/usr/share/doc/libsbml4-perl-doc/perl-api/jquery.js

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl.install
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl.install       
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl.install       
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,2 @@
+usr/lib/perl5
+../lintian/libsbml4-perl usr/share/lintian/overrides

Added: 
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl.lintian-overrides
===================================================================
--- 
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl.lintian-overrides 
                            (rev 0)
+++ 
trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-perl.lintian-overrides 
    2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+libsbml4-perl: incorrect-libdir-in-la-file

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python-doc.docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python-doc.docs    
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python-doc.docs    
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+debian/tmp/usr/share/doc/libsbml-*/python-api

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python-doc.links
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python-doc.links   
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python-doc.links   
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+/usr/share/javascript/jquery/jquery.js 
/usr/share/doc/libsbml4-python-doc/python-api/jquery.js

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python.docs
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python.docs        
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python.docs        
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+debian/tmp/usr/share/doc/libsbml-*/python.txt

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python.install
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python.install     
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-python.install     
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+usr/lib/python*

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-ruby1.8.install
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-ruby1.8.install    
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4-ruby1.8.install    
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+usr/lib/ruby/*/*/*/*.so /usr/lib/ruby/1.8/x86_64-linux/

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.install
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.install            
                (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.install    
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+usr/lib/libsbml.so.*

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.postinst
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.postinst           
                (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.postinst   
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,31 @@
+#!/bin/sh
+# postinst script for libsbml
+#
+# see: dh_installdeb(1)
+
+set -e
+
+case "$1" in
+    configure)
+    for i in `find /usr/lib/ -maxdepth 1 -type f -iname "libsbml.so.*"`
+       do
+       ldconfig $i
+    done
+
+    ;;
+
+    abort-upgrade|abort-remove|abort-deconfigure)
+    ;;
+
+    *)
+        echo "postinst called with unknown argument \`$1'" >&2
+        exit 1
+    ;;
+esac
+
+# dh_installdeb will replace this with shell code automatically
+# generated by other debhelper scripts.
+
+#DEBHELPER#
+
+exit 0

Added: trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.postrm
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.postrm             
                (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/libsbml4.postrm     
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,24 @@
+#!/bin/sh
+# postrm script for libsbml
+#
+# see: dh_installdeb(1)
+
+set -e
+
+case "$1" in
+    purge|remove|upgrade|failed-upgrade|abort-install|abort-upgrade|disappear)
+    ldconfig
+    ;;
+
+    *)
+        echo "postrm called with unknown argument \`$1'" >&2
+        exit 1
+    ;;
+esac
+
+# dh_installdeb will replace this with shell code automatically
+# generated by other debhelper scripts.
+
+#DEBHELPER#
+
+exit 0

Added: trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-java
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-java       
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-java       
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1,2 @@
+libsbml4-java: package-name-doesnt-match-sonames
+libsbml4-java: shlib-without-versioned-soname

Added: trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-matlab
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-matlab     
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-matlab     
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+libsbml4-matlab: sharedobject-in-library-directory-missing-soname

Added: trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-octave
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-octave     
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-octave     
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+libsbml4-octave: package-depends-on-hardcoded-libc

Added: trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-perl
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-perl       
                        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/lintian/libsbml4-perl       
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+libsbml4-perl: incorrect-libdir-in-la-file

Added: trunk/packages/libsbml/branches/libsbml4/debian/rules
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/rules                       
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/rules       2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1,152 @@
+#!/usr/bin/make -f
+# -*- makefile -*-
+# Sample debian/rules that uses debhelper.
+# This file was originally written by Joey Hess and Craig Small.
+# As a special exception, when this file is copied by dh-make into a
+# dh-make output file, you may use that output file without restriction.
+# This special exception was added by Craig Small in version 0.37 of dh-make.
+
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+
+# These are used for cross-compiling and for saving the configure script
+# from having to guess our platform (since we know it already)
+DEB_HOST_GNU_TYPE   ?= $(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)
+DEB_BUILD_GNU_TYPE  ?= $(shell dpkg-architecture -qDEB_BUILD_GNU_TYPE)
+ifneq ($(DEB_HOST_GNU_TYPE),$(DEB_BUILD_GNU_TYPE))
+CROSS= --build $(DEB_BUILD_GNU_TYPE) --host $(DEB_HOST_GNU_TYPE)
+else
+CROSS= --build $(DEB_BUILD_GNU_TYPE)
+endif
+
+
+# shared library versions, option 1
+version=4.3.1
+major=4
+
+libpack := libsbml
+devpack := $(libpack)-dev
+mathpack := $(libpack)-matlab
+perlpack := $(libpack)-dev
+pythonpack := $(libpack)-dev
+javapack := $(libpack)-dev
+debtmp := $(CURDIR)/debian/tmp
+dbgpack := $(libpack)$(major)-dbg
+# Test for matlab; deactivated for libsbml4
+#BIND_MATLAB := $(shell which matlab | grep -q matlab && echo '--with-matlab')
+
+get-orig-source:
+       [ -f ../libsbml_$(version).orig.tar.gz ] ||  wget -O 
../libsbml_$(version).orig.tar.gz 
http://qa.debian.org/watch/sf.php/sbml/libSBML-$(version)-src.tar.gz
+
+config.status: configure
+       dh_testdir
+       # Add here commands to configure the package.
+ifneq "$(wildcard /usr/share/misc/config.sub)" ""
+       cp -f /usr/share/misc/config.sub config.sub
+endif
+ifneq "$(wildcard /usr/share/misc/config.guess)" ""
+       cp -f /usr/share/misc/config.guess config.guess
+endif
+# prepare the debian/control file
+       if [ "$(BIND_MATLAB)" = "--with-matlab" ] ; then \
+           sed -e 's/^#//'  debian/control.in > debian/control ; else \
+           grep -v ^# debian/control.in > debian/control ; fi
+
+       ./configure $(CROSS)    --prefix=/usr                           \
+                               --with-doxygen                          \
+                               --with-perl                             \
+                               --with-python                           \
+                               --with-java                             \
+                               --with-swig                             \
+                               --with-ruby                             \
+                               --with-octave                           \
+                               --with-zlib                             \
+                               --with-bzip2                            \
+                               $(BIND_MATLAB)                          \
+                               --enable-layout                         \
+                               --mandir=\$${prefix}/share/man          \
+                               --infodir=\$${prefix}/share/info        \
+                               CFLAGS="$(CFLAGS)"                      \
+                               LDFLAGS="-Wl,-z,defs"                   
+
+build: build-arch build-indep
+build-arch: build-stamp
+build-indep: build-stamp
+build-stamp:  config.status
+       dh_testdir
+
+       # Add here commands to compile the package.
+       $(MAKE)
+
+       touch $@
+
+clean: 
+       dh_testdir
+       dh_testroot
+       rm -f build-stamp
+
+       # Add here commands to clean up after the build process.
+       [ ! -f Makefile ] || $(MAKE) distclean
+       rm -f config.sub config.guess
+       dh_clean
+       ### NO WAY TO CLEAN, because libsbml patches a lot of files during 
compile process
+       ### dirty solution
+       rm -rf config docs examples macosx src win
+       tar xzf ../libsbml_$(version).orig.tar.gz && mv libsbml-$(version)/* .
+       rmdir libsbml-$(version)/
+
+install: build
+       dh_testdir
+       dh_testroot
+       dh_prep
+       dh_installdirs
+
+       # Add here commands to install the package into debian/libsbml.
+       mkdir -p $(debtmp)/etc
+       cp -a debian/etc $(debtmp)
+#      $(MAKE) install-docs DESTDIR=$(debtmp)
+       $(MAKE) install DESTDIR=$(debtmp)
+#      find $(debtmp)/usr/lib/python2.6/ -type d -name site-packages -exec mv 
{} $(debtmp)/usr/lib/python2.6/dist-packages \; || true
+       rm $(debtmp)/usr/lib/*/dist-packages/libsbml/*.pyc || true
+       mkdir $(debtmp)/usr/lib/perl5
+       mv $(debtmp)/usr/lib/perl/*/* $(debtmp)/usr/lib/perl5/
+       chmod 644 $(debtmp)/usr/share/java/libsbmlj.jar
+       find $(debtmp)/usr/lib/ -type f -exec chmod 644 {} +
+       find $(debtmp)/usr/lib/ -type f -name .packlist -exec rm -f {} +
+       find $(debtmp)/usr/lib/ -type d -iname "*.libs" -exec rm -rf {} +
+#      find $(debtmp)/usr/share/doc/ -type f -name "jquery.js" -exec rm -f {} +
+       sed -i "/dependency_libs/ s/'.*'/''/" `find $(debtmp)/usr/lib/ -name 
'*.la'`
+       strip --strip-unneeded $(debtmp)/usr/lib/*.mex* || true
+       strip --strip-unneeded $(debtmp)/usr/lib/octave/site/oct/*/*.mex || true
+
+# Build architecture-independent files here.
+binary-indep: build install
+# We have nothing to do by default.
+
+# Build architecture-dependent files here.
+binary-arch: build install
+       dh_testdir
+       dh_testroot
+       dh_installchangelogs
+       dh_installdocs
+       dh_installexamples
+       dh_install
+       dh_installman
+       dh_link
+       dh_strip --dbg-package=${dbgpack}
+       dh_compress
+       dh_fixperms
+       dh_makeshlibs
+       dh_makeclilibs -i -V
+       dh_installcligac -i
+       dh_perl
+       dh_python2 --no-guessing-versions
+       dh_installdeb
+       dh_shlibdeps
+       dh_gencontrol
+       dh_md5sums
+       dh_builddeb
+
+binary: binary-indep binary-arch
+.PHONY: build clean binary-indep binary-arch binary install


Property changes on: trunk/packages/libsbml/branches/libsbml4/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/libsbml/branches/libsbml4/debian/source/format
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/source/format               
                (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/source/format       
2012-01-31 16:05:36 UTC (rev 9502)
@@ -0,0 +1 @@
+3.0 (quilt)

Added: trunk/packages/libsbml/branches/libsbml4/debian/watch
===================================================================
--- trunk/packages/libsbml/branches/libsbml4/debian/watch                       
        (rev 0)
+++ trunk/packages/libsbml/branches/libsbml4/debian/watch       2012-01-31 
16:05:36 UTC (rev 9502)
@@ -0,0 +1,2 @@
+version=3
+http://sf.net/sbml/  lib[Ss][Bb][Mm][Ll]-(.*)-src\.zip


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