Étienne Mollier pushed to branch master at Debian Med / libmaus2
Commits: 131bd698 by Étienne Mollier at 2021-06-28T20:03:04+02:00 fix-test-on-32bits.patch forwarded - - - - - 5a1936a1 by Étienne Mollier at 2021-06-29T00:28:58+02:00 spelling-error-in-header.patch applied upstream - - - - - d25d2050 by Étienne Mollier at 2021-06-29T00:31:49+02:00 ready for upload to experimental - - - - - 3 changed files: - debian/changelog - debian/patches/fix-test-on-32bits.patch - − debian/patches/spelling-error-in-header.patch Changes: ===================================== debian/changelog ===================================== @@ -1,10 +1,12 @@ -libmaus2 (2.0.791+dfsg-1) UNRELEASED; urgency=medium +libmaus2 (2.0.791+dfsg-1~0exp0) experimental; urgency=medium * New upstream version * Remove trailing whitespace in debian/changelog (routine-update) * d/control: updated my uploader address + * add fix-test-on-32bits.patch; fix FTBFS on i386 + * removed spelling-error-in-header.patch; applied upstream - -- Étienne Mollier <[email protected]> Sun, 27 Jun 2021 09:55:25 +0200 + -- Étienne Mollier <[email protected]> Tue, 29 Jun 2021 00:02:08 +0200 libmaus2 (2.0.768+dfsg-2) unstable; urgency=medium ===================================== debian/patches/fix-test-on-32bits.patch ===================================== @@ -1,6 +1,6 @@ Description: fix test breaking due to type mismatch on 32 bits platforms Author: Étienne Mollier <[email protected]> -Forwarded: no +Forwarded: https://gitlab.com/german.tischler/libmaus2/-/issues/35 Last-Update: 2021-06-27 --- This patch header follows DEP-3: http://dep.debian.net/deps/dep3/ ===================================== debian/patches/spelling-error-in-header.patch deleted ===================================== @@ -1,51 +0,0 @@ -Description: fix spelling error in header files - This is causing lintian reports spelling-error-in-binary in biobambam2. -Author: Étienne Mollier <[email protected]> -Forwarded: no -Last-Update: 2020-11-18 ---- -This patch header follows DEP-3: http://dep.debian.net/deps/dep3/ ---- libmaus2.orig/src/libmaus2/bambam/BamHeaderLowMem.hpp -+++ libmaus2/src/libmaus2/bambam/BamHeaderLowMem.hpp -@@ -699,7 +699,7 @@ - if ( ! isi ) - { - ::libmaus2::exception::LibMausException se; -- se.getStream() << "BamHeaderLowMem: defect @PG line with non-existant parent " << std::string(text+parstart,text+parend) << ":\n" << PLA->getLine(text,lineid) << std::endl; -+ se.getStream() << "BamHeaderLowMem: defect @PG line with non-existent parent " << std::string(text+parstart,text+parend) << ":\n" << PLA->getLine(text,lineid) << std::endl; - se.finish(); - throw se; - } ---- libmaus2.orig/src/libmaus2/bambam/HeaderLine.hpp -+++ libmaus2/src/libmaus2/bambam/HeaderLine.hpp -@@ -129,7 +129,7 @@ - if ( ! hasKey(key) ) - { - ::libmaus2::exception::LibMausException se; -- se.getStream() << "bambam::HeaderLine::getValue called for non existant key: " << key << " for line of type " << type << std::endl; -+ se.getStream() << "bambam::HeaderLine::getValue called for non existent key: " << key << " for line of type " << type << std::endl; - se.finish(); - throw se; - } ---- libmaus2.orig/src/libmaus2/fastx/FastABgzfIndex.hpp -+++ libmaus2/src/libmaus2/fastx/FastABgzfIndex.hpp -@@ -98,7 +98,7 @@ - if ( i < 0 ) - { - libmaus2::exception::LibMausException ex; -- ex.getStream() << "::libmaus2::fastx::FastABgzfIndexEntry::operator[] called for non existant id" << std::endl; -+ ex.getStream() << "::libmaus2::fastx::FastABgzfIndexEntry::operator[] called for non existent id" << std::endl; - ex.finish(); - throw ex; - } ---- libmaus2.orig/src/test/testAIO.cpp -+++ libmaus2/src/test/testAIO.cpp -@@ -255,7 +255,7 @@ - - void testPosixFdOverwrite() - { -- std::string const fn = "nonexistant.test.file"; -+ std::string const fn = "nonexistent.test.file"; - std::string const text1 = "Hello world."; - std::string const text2 = "new text"; - View it on GitLab: https://salsa.debian.org/med-team/libmaus2/-/compare/f1346d5ddfe72f803a11d7d57448811f862266de...d25d20509eeaa4dac12f4eb198c437db65d32ad5 -- View it on GitLab: https://salsa.debian.org/med-team/libmaus2/-/compare/f1346d5ddfe72f803a11d7d57448811f862266de...d25d20509eeaa4dac12f4eb198c437db65d32ad5 You're receiving this email because of your account on salsa.debian.org.
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