Steffen Möller pushed to branch master at Debian Med / qiime
Commits: 78048899 by Steffen Möller at 2021-08-19T18:29:31+00:00 Update TODO - - - - - 1 changed file: - debian/TODO Changes: ===================================== debian/TODO ===================================== @@ -5,16 +5,17 @@ Plugins already accepted (added to the dependencies of qiime) ________________________ - q2cli - Click-based command line interface for QIIME 2 - - q2-cutadapt - QIIME 2 plugin to work with adapters in sequence data - - q2-types - QIIME 2 plugin defining types for microbiome analysis - - q2templates - Design template package for QIIME 2 Plugins - - q2-metadata - QIIME 2 plugin for working with and visualizing Metadata + - q2-cutadapt - QIIME 2 plugin to work with adapters in sequence data - q2-demux - QIIME 2 plugin for demultiplexing of sequence reads - q2-quality-filter - QIIME2 plugin for PHRED-based filtering and trimming - q2-feature-classifier - QIIME 2 plugin supporting taxonomic classification - q2-feature-table - QIIME 2 plugin supporting operations on feature tables + - q2-metadata - QIIME 2 plugin for working with and visualizing Metadata + - q2-quality-control (deps: q2-taxa) + - q2-sample-classifier (deps: q2-feature-table) - q2-taxa (D3-scale-chromatic, thenBy, natural-sort JavaScript dependencies) + - q2-types - QIIME 2 plugin defining types for microbiome analysis Plugins already in the NEW QUEUE @@ -26,22 +27,20 @@ Work presumed ready for upload - q2-composition (https://github.com/qiime2/q2-composition) - - q2-sample-classifier (deps: q2-feature-table) - - q2-emperor - EMPEROR (https://github.com/biocore/emperor) - q2-dada2: No excuse any more: DADA2 (R package) surfaced as r-bioc-dada2 - - q2-quality-control (deps: q2-taxa) - - q2-fragment-insertion (only the first release) - q2-diversity (deps: q2-feature-table, q2-emperor) - q2-longitudinal (deps: q2-feature-table, q2-sample-classifier) + - unifrac (python) + The work already started ________________________ View it on GitLab: https://salsa.debian.org/med-team/qiime/-/commit/7804889973146ead58a4a05340d5b181791dd27e -- View it on GitLab: https://salsa.debian.org/med-team/qiime/-/commit/7804889973146ead58a4a05340d5b181791dd27e You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
