Author: lkajan-guest Date: 2012-04-04 11:50:49 +0000 (Wed, 04 Apr 2012) New Revision: 10315
Modified: trunk/packages/hhsuite/trunk/debian/changelog trunk/packages/hhsuite/trunk/debian/patches/Makefile Log: 2.0.13-2: Added #include <unistd.h> to src/hhsearch.C in order to fix compilation issue with g++-4.7. (Closes: #667201) Modified: trunk/packages/hhsuite/trunk/debian/changelog =================================================================== --- trunk/packages/hhsuite/trunk/debian/changelog 2012-04-04 10:56:23 UTC (rev 10314) +++ trunk/packages/hhsuite/trunk/debian/changelog 2012-04-04 11:50:49 UTC (rev 10315) @@ -1,10 +1,14 @@ -hhsuite (2.0.13-2) UNRELEASED; urgency=low +hhsuite (2.0.13-2) unstable; urgency=low - * debian/upstream: + * [Andreas Tille <[email protected]>] + debian/upstream: - it is (now) possible to support more than one citation - more verbose citation information + * [Laszlo Kajan <[email protected]] + Added #include <unistd.h> to src/hhsearch.C in order to fix compilation + issue with g++-4.7. (Closes: #667201) - -- Andreas Tille <[email protected]> Mon, 02 Apr 2012 09:39:54 +0200 + -- Laszlo Kajan <[email protected]> Wed, 04 Apr 2012 13:45:49 +0200 hhsuite (2.0.13-1) unstable; urgency=low Modified: trunk/packages/hhsuite/trunk/debian/patches/Makefile =================================================================== --- trunk/packages/hhsuite/trunk/debian/patches/Makefile 2012-04-04 10:56:23 UTC (rev 10314) +++ trunk/packages/hhsuite/trunk/debian/patches/Makefile 2012-04-04 11:50:49 UTC (rev 10315) @@ -194,7 +194,15 @@ --- a/src/hhsearch.C +++ b/src/hhsearch.C -@@ -326,7 +326,7 @@ +@@ -40,6 +40,7 @@ + #include <float.h> // FLT_MIN + #include <ctype.h> // islower, isdigit etc + #include <time.h> // clock_gettime etc. (in realtime library (-lrt compiler option)) ++#include <unistd.h> + #include <errno.h> // perror() + #include <cassert> + #include <stdexcept> +@@ -326,7 +327,7 @@ printf(" -pcc [0,3] extinction exponent for tau(Neff) (def=%-.1f) \n",par.pcc); printf(" -pcw [0,3] weight of pos-specificity for pcs (def=%-.1f) \n",par.pcw); // HHsearch option should be the same as HHblits option!! _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
