Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
e29b2472 by Andreas Tille at 2021-08-27T01:51:17+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 26 Aug 2021 13:42:04 +0000
+Last-Update: Fri, 27 Aug 2021 01:42:04 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,101 @@
-Last-Update: Thu, 26 Aug 2021 13:42:04 +0000
+Last-Update: Fri, 27 Aug 2021 01:42:04 +0000
+
+ source | version |
upstream_version | uploaders
| Last uploader | Last uploaded
+-------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+-------------------------+------------------------
+ bamtools | 2.5.1 | 2.5.2
| Andreas Tille,Dominique Belhachemi,Kevin Murray,Michael
R. Crusoe | Andreas Tille | 2021-04-15 20:17:33+00
+ bart | 0.6.00 | 0.7.00
| Martin Uecker
| Andreas Tille | 2020-09-21 15:18:48+00
+ bart-cuda | 0.6.00 | 0.7.00
| Martin Uecker
| Martin Uecker | 2021-02-03 22:00:10+00
+ bbmap | 38.90 | 38.92
| Andreas Tille
| Nilesh Patra | 2021-02-05 10:48:39+00
+ bcbio | 1.2.5 | 1.2.8
| Steffen Moeller
| Steffen Moeller | 2021-01-26 13:33:27+00
+ bcftools | 1.11 | 1.13
| Michael R. Crusoe
| Andreas Tille | 2020-10-01 14:35:48+00
+ beagle | 5.2-210628 | 210628
| Dylan Aïssi
| Dylan Aïssi | 2021-08-21 07:48:32+00
+ biojava-live | 1.7.1 | 1.9.5
| Andreas Tille,Olivier Sallou,Steffen Moeller
| Andreas Tille | 2021-01-04 16:03:36+00
+ biomaj3 | 3.1.18 | 3.1.20
| Olivier Sallou
| Olivier Sallou | 2021-02-19 11:03:29+00
+ biomaj3-download | 3.2.4 | 3.2.6
| Olivier Sallou
| Andreas Tille | 2021-01-17 10:48:30+00
+ biosig | 2.1.2 | 2.3.3
| Alois Schlögl,Michael Hanke,Yaroslav Halchenko
| Alois Schlögl | 2021-04-15 19:48:24+00
+ bmtk | 0.0+git20210109.8572664 |
0.0+git20210803.b050ba8 | Shayan Doust
| Nilesh Patra | 2021-08-15 09:33:30+00
+ camitk | 4.1.2 | 5.0.2
| Andreas Tille,Emmanuel Promayon
| Andreas Tille | 2020-01-20 13:35:07+00
+ cwltool | 3.0.20210124104916 |
3.1.20210816212154 | Michael R. Crusoe
| Michael R. Crusoe | 2021-01-25 09:48:25+00
+ daligner | 1.0+git20200727.ed40ce5 |
1.0+git20210330.f61b8cf | Andreas Tille
| Andreas Tille | 2020-08-17 10:48:47+00
+ damapper | 0.0+git20200322.b2c9d7f |
0.0+git20210330.ab45103 | Shayan Doust
| Andreas Tille | 2020-11-13 10:04:28+00
+ dazzdb | 1.0+git20201103.8d98c37 |
1.0+git20210330.70d2c8e | Andreas Tille,Pranav Ballaney
| Andreas Tille | 2021-01-19 09:18:32+00
+ falcon | 1.8.8 | 2.1.4
| Afif Elghraoui
| Afif Elghraoui | 2017-12-16 08:49:13+00
+ fis-gtm | 6.3-014 | 7.0-000
| Amul Shah,Andreas Tille
| Andreas Tille | 2021-01-11 13:03:22+00
+ genometester | 4.0+git20200511.91cecb5 |
4.0+git20210823.d837c4d | Andreas Tille,Liubov Chuprikova
| Steffen Moeller | 2020-05-17 18:35:08+00
+ ggd-utils | 0.0.7 | 1.0.0
| Nilesh Patra
| Nilesh Patra | 2020-11-18 13:18:48+00
+ gjh-asl-json | 0.0+git20180428.eb8720e |
0.0+git20210628.867c5da | Andrei Rozanski
| Andreas Tille | 2020-10-26 17:34:11+00
+ gnumed-client | 1.8.5 | 1.8.6
| Andreas Tille,Sebastian Hilbert
| Andreas Tille | 2021-03-03 20:20:27+00
+ gnumed-server | 22.15 | 22.16
| Andreas Tille,Sebastian Hilbert
| Andreas Tille | 2021-01-24 07:48:25+00
+ gwyddion | 2.57 | 2.59
| Andreas Tille
| Andreas Tille | 2021-01-17 17:49:08+00
+ htsjdk | 2.23.0 | 2.24.1
| Andreas Tille,Charles Plessy,Olivier Sallou,Vincent
Danjean | Olivier Sallou | 2020-09-22 13:48:34+00
+ htslib | 1.11 | 1.13
| Andreas Tille,Charles Plessy,Michael R. Crusoe,Steffen
Moeller | Michael R. Crusoe | 2021-01-02 15:49:45+00
+ idseq-bench | 0.0~git20200902.8241a9a |
0.0~git20210602.27fb6dc | Sao I Kuan
| Andreas Tille | 2021-01-17 17:49:14+00
+ igdiscover | 0.11 | 0.12.3
| Steffen Moeller
| Andreas Tille | 2019-09-06 07:04:02+00
+ igraph | 0.8.5 | 0.9.4
| Andreas Tille,Jerome Benoit
| Jerome Benoit | 2020-12-26 16:05:29+00
+ intake | 0.6.1 | 0.6.3
| Shayan Doust,Étienne Mollier
| Étienne Mollier | 2021-07-19 19:18:58+00
+ invesalius | 3.1.99994 | 3.1.99995
| Andreas Tille,Thiago Franco de Moraes
| Thiago Franco de Moraes | 2020-05-07 05:19:11+00
+ ismrmrd | 1.4.2.1 | 1.5.0
| Ghislain Antony Vaillant
| Gianfranco Costamagna | 2020-12-22 15:05:59+00
+ jebl2 | 0.1+git20201011.969bd4b |
0.1+git20210205.1f13ac7 | Andreas Tille,Pierre Gruet
| Pierre Gruet | 2020-10-12 20:34:21+00
+ kineticstools | 0.6.1+git20200729.e3723e0 |
0.6.1+git20210811.276ca9c | Andreas Tille,Étienne Mollier
| Étienne Mollier | 2020-11-26 09:49:39+00
+ king-probe | 2.16.160404+git20200121.9b198c1 |
2.16.160404+git20210306.29542fb | Andreas Tille,Malihe Asemani,Michael
Prisant,Pranav Ballaney | Pranav Ballaney | 2020-07-28
04:48:35+00
+ kissplice | 2.5.3 | 2.5.4
| Andreas Tille,David Parsons
| Nilesh Patra | 2020-10-26 05:18:26+00
+ libatomic-queue | 0.0+git20201108.d9d66b6 |
0.0+git20210731.aa08199 | Andreas Tille,Nilesh Patra,Steffen Moeller
| Michael R. Crusoe | 2021-04-25 13:03:49+00
+ libbigwig | 0.4.4 | 0.4.6
| Steffen Moeller
| Andreas Tille | 2020-03-27 22:19:17+00
+ libbio-db-ncbihelper-perl | 1.7.6 | 1.7.7
| Michael R. Crusoe
| Andreas Tille | 2021-03-04 08:18:58+00
+ libmaus2 | 2.0.791-1~0exp0 | 2.0.800
| Andreas Tille,Steffen Moeller,Étienne Mollier
| Étienne Mollier | 2021-08-24 20:39:26+00
+ libncl | 2.1.21+git20190531.feceb81 |
2.1.21+git20210811.b1213a7 | Andreas Tille
| Andreas Tille | 2020-07-23 13:20:04+00
+ libquazip | 0.9.1 | 1.1
| Alf Gaida,Andreas Tille,Stefan Ahlers
| Andreas Tille | 2020-07-23 14:45:42+00
+ libstatgen | 1.0.14 | 1.0.15
| Dylan Aïssi
| Andreas Tille | 2020-08-03 21:04:25+00
+ libthread-pool | 3.0.2 | 4.0.0
| Andreas Tille
| Michael R. Crusoe | 2021-01-19 08:25:38+00
+ libzeep | 5.0.2 | 5.1.1
| Andreas Tille,Maarten L. Hekkelman
| Maarten L. Hekkelman | 2020-11-16 17:03:51+00
+ macsyfinder | 2.0~rc1 | 2.0~rc4
| bertrand Neron
| Michael R. Crusoe | 2021-02-11 11:33:21+00
+ milib | 1.13 | 1.14.1
| Steffen Moeller
| Andreas Tille | 2021-01-19 09:50:31+00
+ minia | 3.2.1+git20200522.4960a99 |
3.2.1+git20210526.594d6e3 | Andreas Tille,Olivier Sallou
| Steffen Moeller | 2020-05-24 16:09:08+00
+ mothur | 1.44.3 | 1.45.3
| Andreas Tille,Steffen Moeller,Tomasz Buchert
| Andreas Tille | 2020-12-05 06:33:22+00
+ mrc | 1.2.3 | 1.3
| Maarten L. Hekkelman
| Maarten L. Hekkelman | 2020-11-09 08:49:20+00
+ mummer | 3.23 |
4.0.0.~beta5 | Andreas Tille,Charles Plessy,Steffen Moeller
| Nilesh Patra | 2020-12-26 19:06:19+00
+ mypy | 0.812 | 0.910
| Michael R. Crusoe
| Michael R. Crusoe | 2021-02-20 10:03:57+00
+ ncbi-blast+ | 2.11.0 | 2.12.0
| Aaron M. Ucko,Andreas Tille,Olivier Sallou
| Aaron M. Ucko | 2021-02-01 02:50:38+00
+ ncbi-entrez-direct | 14.6.20210224 |
15.5.20210820 | Aaron M. Ucko
| Aaron M. Ucko | 2021-07-08 22:03:29+00
+ neo | 0.9.0 | 0.10.0
| Michael Hanke,Yaroslav Halchenko
| Andreas Tille | 2020-11-25 10:49:14+00
+ orthanc-dicomweb | 1.5 | 1.6
| Andreas Tille,Sebastien Jodogne
| Sebastien Jodogne | 2021-06-07 09:49:01+00
+ peptidebuilder | 1.1.0 | 1.4
| Nilesh Patra,Steffen Moeller
| Nilesh Patra | 2020-12-06 17:21:33+00
+ phyx | 1.01 | 1.3
| Andreas Tille
| Nilesh Patra | 2020-04-17 20:39:19+00
+ picard-tools | 2.24.1 | 2.26.0
| Andreas Tille,Charles Plessy,Olivier Sallou,Steffen
Moeller,Vincent Danjean | Andreas Tille | 2021-01-28 07:19:59+00
+ pigx-rnaseq | 0.0.10 | 0.0.19
| Steffen Moeller
| Andreas Tille | 2020-10-23 14:34:47+00
+ pybel | 0.14.10 | 0.15.4
| Steffen Moeller
| Andreas Tille | 2020-09-29 13:18:42+00
+ pybigwig | 0.3.17 | 0.3.18
| Diane Trout
| Diane Trout | 2019-09-05 04:49:09+00
+ python-anndata | 0.7.5 | 0.7.6
| Diane Trout,Steffen Moeller
| Michael R. Crusoe | 2021-02-10 10:18:37+00
+ python-biopython | 1.78 | 1.79
| Andreas Tille,Charles Plessy,Étienne Mollier
| Étienne Mollier | 2021-08-22 21:35:23+00
+ python-bx | 0.8.9 | 0.8.11
| Michael R. Crusoe,Steffen Moeller
| Steffen Moeller | 2021-02-24 21:25:41+00
+ python-datacache | 0.4.7 | 1.1.5
| Steffen Moeller
| Nilesh Patra | 2021-08-18 17:34:48+00
+ python-easydev | 0.10.1 | 0.11.1
| Olivier Sallou
| Andreas Tille | 2020-09-29 08:33:47+00
+ python-pbcommand | 2.1.1+git20201023.cc0ed3d |
2.1.1+git20210817.218c193 | Andreas Tille
| Steffen Moeller | 2020-12-07 16:12:44+00
+ python-pbcore | 1.7.1+git20200430.a127b1e |
1.7.1+git20210817.799e6f2 | Andreas Tille
| Steffen Moeller | 2020-05-05 16:19:13+00
+ python-pyfaidx | 0.5.9.5 | 0.6.1
| Andreas Tille
| Nilesh Patra | 2021-08-15 12:21:01+00
+ python-pynndescent | 0.5.2 | 0.5.4
| Andreas Tille
| Nilesh Patra | 2021-07-03 18:34:34+00
+ python-pysam | 0.15.4 | 0.16.0.1
| Andreas Tille,Charles Plessy
| Andreas Tille | 2020-05-08 19:04:59+00
+ python-sinfo | 0.3.1 | 1.0.0
| Robbi Nespu
| Nilesh Patra | 2021-03-09 06:33:26+00
+ python-upsetplot | 0.5.0 | 0.6.0
| Diane Trout,Nilesh Patra
| Nilesh Patra | 2021-08-19 11:35:10+00
+ q2-demux | 2020.11.1 | 2021.4.0
| Liubov Chuprikova,Steffen Moeller
| Nilesh Patra | 2021-08-24 18:06:37+00
+ resfinder-db | 0.0+git20200408.0322c0d |
0.0+git20210816.e14da67 | Andreas Tille
| Andreas Tille | 2020-04-18 06:34:00+00
+ samtools | 1.11 | 1.13
| Andreas Tille,Charles Plessy
| Andreas Tille | 2020-10-01 15:20:29+00
+ seirsplus | 0.1.4+really | 1.0.9
| Sao I Kuan
| Sao I Kuan | 2021-08-16 11:08:23+00
+ seriation | 0.1+git20201220.04e6202 |
0.1+git20210125.fc7b8cb | Nilesh Patra
| Nilesh Patra | 2020-12-26 06:33:32+00
+ simpleitk | 1.0.1 | 2.1.0
| Ghislain Antony Vaillant
| Andreas Tille | 2019-01-30 10:06:08+00
+ smart-open | 1.11.1 | 5.2.0
| Sao I Kuan
| Sao I Kuan | 2020-07-05 14:33:51+00
+ sorted-nearest | 0.0+git20200319.8204815 |
0.0+git20210524.610d16a | Nilesh Patra
| Andreas Tille | 2020-07-15 09:06:56+00
+ spaln | 2.4.1 | 2.4.5
| Steffen Moeller
| Helmut Grohne | 2021-01-05 17:04:26+00
+ spdlog | 1.8.5 | 1.9.2
| Michael R. Crusoe
| xiao sheng wen | 2021-08-18 17:50:32+00
+ suitename | 0.3.070919+git20180613.ebb1325 |
0.3.070919+git20210823.dd117bc | Andreas Tille,Michael Prisant
| Nilesh Patra | 2020-11-11 10:04:35+00
+ t-coffee | 13.41.0.28bdc39 |
13.45.0.4846264 | Andreas Tille,Steffen Moeller
| Etienne Mollier | 2020-06-17 19:49:21+00
+ tao-config | 0.0+git20200604.84a7383 |
0.0+git20210721.f947e07 | Shayan Doust
| Andreas Tille | 2020-07-20 20:26:07+00
+ tao-json | 0.0+git20200604.f357d72 |
0.0+git20210817.19a347e | Shayan Doust
| Andreas Tille | 2020-07-20 20:51:27+00
+ trinityrnaseq | 2.11.0 | 2.13.0
| Michael R. Crusoe
| Michael R. Crusoe | 2021-01-19 13:36:20+00
+ vg | 1.30.0 | 1.34.0
| Michael R. Crusoe
| Michael R. Crusoe | 2021-01-27 12:20:10+00
+ vienna-rna | 2.4.17 | 2.4.18
| Olivier Sallou,Steffen Moeller
| Andreas Tille | 2020-12-11 10:50:57+00
+ xmedcon | 0.16.3 | 0.21.2
| Andreas Tille,Roland Marcus Rutschmann
| Andreas Tille | 2021-01-14 21:07:57+00
+(93 rows)
source | id | severity |
title
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/e29b24726d02ee7d9512ea4f22ff2755e715adc0
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/e29b24726d02ee7d9512ea4f22ff2755e715adc0
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