Steffen Möller pushed to branch master at Debian Med / toil


Commits:
d9dfe273 by Steffen Moeller at 2021-09-03T19:25:59+02:00
Skipping networing-associated tests

- - - - -


2 changed files:

- debian/changelog
- debian/rules


Changes:

=====================================
debian/changelog
=====================================
@@ -4,10 +4,8 @@ toil (5.4.0-1) UNRELEASED; urgency=medium
   * New upstream version
   * Standards-Version: 4.6.0 (routine-update)
   * d/p/python3: adopted upstream
-
-  * TODO: FTBFS
-    Failures seem to be caused by missing contacts to Kubernetes clusters
-    or AWS.
+  * skipped networking-based tests
+  * d/u/metadta: onfirmed missing registry entries
 
  -- Steffen Moeller <[email protected]>  Fri, 03 Sep 2021 18:01:42 +0200
 


=====================================
debian/rules
=====================================
@@ -23,7 +23,7 @@ override_dh_auto_install:
 override_dh_auto_test:
 ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
        PYBUILD_SYSTEM=custom \
-               PYBUILD_TEST_ARGS='HOME={home_dir} {interpreter} setup.py 
develop --user && PYTHONPATH={dir}/src:$$PYTHONPATH 
PATH={home_dir}/.local/bin/:$$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True 
{interpreter} -m pytest -vv -W ignore --ignore 
src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore 
src/toil/test/wdl/toilwdlTest.py --ignore src/toil/test/cwl/cwlTest.py -k "not 
test_bioconda and not test_run_conformance and not testImportFtpFile and not 
ToilWdlIntegrationTest and not SortTest and not testCwlexample" 
{dir}/src/toil/test' \
+               PYBUILD_TEST_ARGS='HOME={home_dir} {interpreter} setup.py 
develop --user && PYTHONPATH={dir}/src:$$PYTHONPATH 
PATH={home_dir}/.local/bin/:$$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True 
{interpreter} -m pytest -vv -W ignore --ignore 
src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore 
src/toil/test/wdl/toilwdlTest.py --ignore src/toil/test/cwl/cwlTest.py --ignore 
src/toil/test/src/promisedRequirementTest.py --ignore 
src/toil/test/lib/test_ec2.py --ignore 
src/toil/test/batchSystems/batchSystemTest.py -k "not test_bioconda and not 
test_run_conformance and not testImportFtpFile and not ToilWdlIntegrationTest 
and not SortTest and not testCwlexample" {dir}/src/toil/test' \
                dh_auto_test
 endif
 



View it on GitLab: 
https://salsa.debian.org/med-team/toil/-/commit/d9dfe273744621900ca6f3c590f0bb89fc49152c

-- 
View it on GitLab: 
https://salsa.debian.org/med-team/toil/-/commit/d9dfe273744621900ca6f3c590f0bb89fc49152c
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