Andreas Tille pushed to branch master at Debian Med / ivar
Commits: bf52d1c5 by Andreas Tille at 2021-09-22T15:09:24+02:00 add gcc-11_2.patch; fixes ftbfs with Gcc 11 - - - - - 5e3caa48 by Andreas Tille at 2021-09-22T15:12:03+02:00 routine-update: Ready to upload to unstable - - - - - 3 changed files: - debian/changelog - + debian/patches/gcc-11_2.patch - debian/patches/series Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,11 @@ +ivar (1.3.1+dfsg-3) unstable; urgency=medium + + * add gcc-11_2.patch; fixes ftbfs with Gcc 11 (thanks for the patch + to Gianfranco Costamagna) + Closes: #984067 + + -- Andreas Tille <[email protected]> Wed, 22 Sep 2021 15:09:57 +0200 + ivar (1.3.1+dfsg-2) unstable; urgency=medium * add forward-build-options.patch; build ivar with hardened build options ===================================== debian/patches/gcc-11_2.patch ===================================== @@ -0,0 +1,23 @@ +Description: Fix another gcc-11 build failure due to uninitialized variable +Author: Gianfranco Costamagna <[email protected]> +Bug-Debian: https://bugs.debian.org/984067 +Forwarded: +Last-Update: 2021-09-22 + +--- ivar-1.3.1+dfsg.orig/tests/test_primer_trim_edge_cases.cpp ++++ ivar-1.3.1+dfsg/tests/test_primer_trim_edge_cases.cpp +@@ -29,7 +29,12 @@ int main(){ + hts_itr_t *iter = NULL; + iter = sam_itr_querys(idx, header, region_.c_str()); + bam1_t *aln = bam_init1(); +- cigar_ t; ++ cigar_ t = { ++ NULL, ++ false, ++ 0, ++ 0 ++ }; + uint32_t *cigar; + int primer_ctr = 0; + int ctr = 0; + ===================================== debian/patches/series ===================================== @@ -1,4 +1,5 @@ Fix-warning.patch forward-build-options.patch gcc-11.patch +gcc-11_2.patch privacy-breach.patch View it on GitLab: https://salsa.debian.org/med-team/ivar/-/compare/f2c38ea22ac7797e28d770ff0c161967c1581db4...5e3caa488825527ab71fef9287cc3eb350ef83f6 -- View it on GitLab: https://salsa.debian.org/med-team/ivar/-/compare/f2c38ea22ac7797e28d770ff0c161967c1581db4...5e3caa488825527ab71fef9287cc3eb350ef83f6 You're receiving this email because of your account on salsa.debian.org.
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