Andreas Tille pushed to branch master at Debian Med / pairtools
Commits: 9e389d6e by Andreas Tille at 2021-09-22T15:17:59+02:00 Drop debug package - - - - - 2ef9addb by Andreas Tille at 2021-09-22T15:18:28+02:00 routine-update: Standards-Version: 4.6.0 - - - - - 73575696 by Andreas Tille at 2021-09-22T15:18:37+02:00 Apply multi-arch hints. + python3-pairtools-examples: Add Multi-Arch: same. Changes-By: apply-multiarch-hints - - - - - 5ccb6782 by Andreas Tille at 2021-09-22T15:36:12+02:00 Install usr/bin/pairtools and mark other files not-installed - - - - - 520b9e08 by Andreas Tille at 2021-09-22T15:44:55+02:00 Drop unneeded Build-Depends - - - - - 3a46ec10 by Andreas Tille at 2021-09-22T15:45:50+02:00 Force python3 interpreter in wrapper script - - - - - 95ad3272 by Andreas Tille at 2021-09-22T15:49:25+02:00 Wrapper tool was only built due to *-dbg Build-Depends - - - - - abfab838 by Andreas Tille at 2021-09-22T15:51:49+02:00 Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/control - + debian/not-installed - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,15 @@ +pairtools (0.3.0-3) unstable; urgency=medium + + * Team upload. + * Drop debug package + Closes: #994318 + * Standards-Version: 4.6.0 (routine-update) + * Apply multi-arch hints. + + python3-pairtools-examples: Add Multi-Arch: same. + * Install usr/bin/pairtools and mark other files not-installed + + -- Andreas Tille <[email protected]> Wed, 22 Sep 2021 15:50:11 +0200 + pairtools (0.3.0-2) unstable; urgency=medium * Team upload. ===================================== debian/control ===================================== @@ -6,14 +6,12 @@ Uploaders: Antoni Villalonga <[email protected]> Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, - python3-all-dbg, cython3, - cython3-dbg, python3-setuptools, python3-click, python3-numpy, python3-sphinx-click, -Standards-Version: 4.5.0 +Standards-Version: 4.6.0 Homepage: https://github.com/mirnylab/pairtools Vcs-Browser: https://salsa.debian.org/med-team/pairtools Vcs-Git: https://salsa.debian.org/med-team/pairtools.git @@ -38,32 +36,12 @@ Description: Framework to process sequencing data from a Hi-C experiment - Select Hi-C pairs given flexibly defined criteria - Restore .sam alignments from Hi-C pairs -Package: python3-pairtools-dbg -Architecture: any -Section: debug -Depends: ${shlibs:Depends}, - ${misc:Depends}, - ${python3:Depends}, - python3-pairtools (= ${binary:Version}) -Description: Process sequencing data from a Hi-C experiment (debug build) - Debug files for python3-pairtools, a simple and fast command-line framework to - process sequencing data from a Hi-C experiment. - . - Process pair-end sequence alignments and perform the following operations: - . - - Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end - sequences of Hi-C DNA molecules - - Sort .pairs files for downstream analyses - - Detect, tag and remove PCR/optical duplicates - - Generate extensive statistics of Hi-C datasets - - Select Hi-C pairs given flexibly defined criteria - - Restore .sam alignments from Hi-C pairs - Package: python3-pairtools-examples Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, Enhances: python3-pairtools +Multi-Arch: same Description: Process sequencing data from a Hi-C experiment (examples) Simple and fast command-line framework to process sequencing data from a Hi-C experiment. ===================================== debian/not-installed ===================================== @@ -0,0 +1 @@ +usr/lib/python3.9/dist-packages/ ===================================== debian/rules ===================================== @@ -4,7 +4,6 @@ DEB_BUILD_MAINT_OPTIONS = hardening=+all DPKG_EXPORT_BUILDFLAGS = 1 export PYBUILD_DESTDIR_python3=debian/python3-pairtools/ -export PYBUILD_DESTDIR_python3-dbg=debian/python3-pairtools-dbg/ %: dh $@ --with python3 --buildsystem=pybuild @@ -16,12 +15,3 @@ override_dh_auto_clean: override_dh_auto_install: cd doc && make man dh_auto_install - -override_dh_strip: - dh_strip -ppython3-pairtools --dbg-package=python3-pairtools-dbg - rm -rf debian/python3-pairtools-dbg/usr/share/doc/python3-pairtools-dbg - ln -s python3-pairtools debian/python3-pairtools-dbg/usr/share/doc/python3-pairtools-dbg - -override_dh_installdeb: - rm -rf ./debian/python3-pairtools-dbg/usr/bin - dh_installdeb View it on GitLab: https://salsa.debian.org/med-team/pairtools/-/compare/3dfd7b504fd0264a0508c18daa699af702a5c082...abfab838382b00f9c6efecb7735e792c60ed4b1b -- View it on GitLab: https://salsa.debian.org/med-team/pairtools/-/compare/3dfd7b504fd0264a0508c18daa699af702a5c082...abfab838382b00f9c6efecb7735e792c60ed4b1b You're receiving this email because of your account on salsa.debian.org.
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