Pierre Gruet pushed to branch master at Debian Med / sepp
Commits: edfbdeb5 by Pierre Gruet at 2021-09-29T15:04:18+02:00 Not advertising tipp at the moment, it has not exited the NEW queue yet - - - - - dc541e68 by Pierre Gruet at 2021-09-29T15:10:39+02:00 Trim trailing whitespace. Changes-By: lintian-brush Fixes: lintian: trailing-whitespace See-also: https://lintian.debian.org/tags/trailing-whitespace.html - - - - - 8f23da4d by Pierre Gruet at 2021-09-29T18:41:52+02:00 Upload to unstable - - - - - 3 changed files: - debian/changelog - debian/control - − debian/sepp.NEWS Changes: ===================================== debian/changelog ===================================== @@ -1,4 +1,4 @@ -sepp (4.5.1+dfsg-1) UNRELEASED; urgency=medium +sepp (4.5.1+dfsg-1) unstable; urgency=medium [Pierre Gruet] * New upstream version 4.5.1+dfsg @@ -6,7 +6,6 @@ sepp (4.5.1+dfsg-1) UNRELEASED; urgency=medium * tipp is now shipped in another package: - deleting information related to tipp in the debian/ folder - adding d/sepp.maintscript to remove /etc/sepp/tipp/config - - providing a NEWS file to inform users that tipp now has its own package * Raising Standards version to 4.6.0 (no change) * Refreshing patches, deleting three upstreamed ones * Using the Debian path of hmmbuild in the test testUPP @@ -17,7 +16,7 @@ sepp (4.5.1+dfsg-1) UNRELEASED; urgency=medium [Steffen Moeller] * Fixed omitted invocation of unversioned 'python' in run-sepp.sh - -- Pierre Gruet <[email protected]> Mon, 27 Sep 2021 17:28:34 +0200 + -- Pierre Gruet <[email protected]> Wed, 29 Sep 2021 17:16:33 +0200 sepp (4.3.10+dfsg-5) unstable; urgency=medium @@ -34,7 +33,7 @@ sepp (4.3.10+dfsg-4) unstable; urgency=medium * d/rules clean: Allowing for repeated builds cleaning *.jar *.class -- Steffen Moeller <[email protected]> Sat, 12 Dec 2020 19:39:54 +0100 - + sepp (4.3.10+dfsg-3) unstable; urgency=medium * Team upload. ===================================== debian/control ===================================== @@ -33,7 +33,6 @@ Depends: ${shlibs:Depends}, libgoogle-gson-java, libjson-java, ncbi-blast+ -Suggests: tipp Description: phylogeny with ensembles of Hidden Markov Models The tool SEPP implementing these methods uses ensembles of Hidden Markov Models (HMMs) in different ways, each focusing on a different problem. ===================================== debian/sepp.NEWS deleted ===================================== @@ -1,10 +0,0 @@ -sepp (4.5.1+dfsg-1) unstable; urgency=medium - - The scripts - - run_abundance.py - - run_tipp.py - - run_tipp_tool.py - are no longer provided by the sepp package. Instead, they are shipped by - the tipp package. If you use them, you should consider installing tipp. - - -- Pierre Gruet <[email protected]> Mon, 27 Sep 2021 18:22:49 +0200 View it on GitLab: https://salsa.debian.org/med-team/sepp/-/compare/141f87ee53a14a19c7d376a03e81ea47377d2cc6...8f23da4dd72117ed39b7d98913e3cd536cf10e2a -- View it on GitLab: https://salsa.debian.org/med-team/sepp/-/compare/141f87ee53a14a19c7d376a03e81ea47377d2cc6...8f23da4dd72117ed39b7d98913e3cd536cf10e2a You're receiving this email because of your account on salsa.debian.org.
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