Michael R. Crusoe pushed to branch master at Debian Med / trinityrnaseq
Commits: 9d5f0922 by Michael R. Crusoe at 2021-10-22T15:30:45+02:00 adjust cmake invocation - - - - - 2e9416aa by Michael R. Crusoe at 2021-10-22T15:36:23+02:00 new patch: debian/patches/which_command_v to use 'command -v' instead of which - - - - - 8ebf7f87 by Michael R. Crusoe at 2021-11-07T17:10:59+01:00 routine-update: New upstream version - - - - - 505b894c by Michael R. Crusoe at 2021-11-07T17:11:05+01:00 New upstream version 2.13.2+dfsg - - - - - 22908340 by Michael R. Crusoe at 2021-11-07T17:13:45+01:00 Update upstream source from tag 'upstream/2.13.2+dfsg' Update to upstream version '2.13.2+dfsg' with Debian dir 2745b018f7be12e55e2e8c9e85b3e29a91252865 - - - - - 983bf734 by Michael R. Crusoe at 2021-11-07T17:13:45+01:00 routine-update: Standards-Version: 4.6.0 - - - - - 7673daf7 by Michael R. Crusoe at 2021-11-08T00:36:15+01:00 Refresh patches - - - - - 5179a51e by Michael R. Crusoe at 2021-11-08T00:36:16+01:00 routine-update: Ready to upload to unstable - - - - - 30 changed files: - Analysis/DifferentialExpression/prep_n_run_GOplot.pl → Analysis/DifferentialExpression/deprecated/prep_n_run_GOplot.pl - Analysis/FL_reconstruction_analysis/util/blat_full_length_mappings.pl - Analysis/SuperTranscripts/AllelicVariants/run_variant_calling.py - Analysis/SuperTranscripts/Trinity_gene_splice_modeler.py - Analysis/SuperTranscripts/pylib/Node_alignment.py - Analysis/SuperTranscripts/pylib/Trinity_fasta_parser.py - Changelog.txt - Chrysalis/CMakeLists.txt - Chrysalis/analysis/QuantifyGraph.cc - Chrysalis/analysis/ReadsToTranscripts.cc - Chrysalis/analysis/sequenceUtil.cc - Chrysalis/analysis/sequenceUtil.h - Docker/Dockerfile - Docker/VERSION.txt - Docker/cleanMe.sh - Docker/run_ext_test_docker.sh - Docker/run_ext_test_singularity.sh - Docker/run_test_docker.sh - Trinity - − bioconda_recipe/trinity/2.1.1/build.sh - − bioconda_recipe/trinity/2.1.1/meta.yaml - − bioconda_recipe/trinity/2.2.0/Build.PL - − bioconda_recipe/trinity/2.2.0/build.sh - − bioconda_recipe/trinity/2.2.0/makefile.clean.patch - − bioconda_recipe/trinity/2.2.0/meta.yaml - − bioconda_recipe/trinity/2.2.0/trinity-plugins.makefile.clean.patch - − bioconda_recipe/trinity/2.3.2/Build.PL - − bioconda_recipe/trinity/2.3.2/build.sh - − bioconda_recipe/trinity/2.3.2/makefile.clean.patch - − bioconda_recipe/trinity/2.3.2/meta.yaml The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/compare/234c2bdeb9780ce7fdbc83f13ce782ce296f820e...5179a51e66583ac0501467f2cc53a489c7d98e57 -- View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/compare/234c2bdeb9780ce7fdbc83f13ce782ce296f820e...5179a51e66583ac0501467f2cc53a489c7d98e57 You're receiving this email because of your account on salsa.debian.org.
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