Andreas Tille pushed to branch master at Debian Python Team / packages / python-ncls
Commits: 3c6adc2b by Andreas Tille at 2022-01-02T18:15:41+01:00 Move package to Debian Python Team - - - - - 03f55351 by Andreas Tille at 2022-01-02T18:16:25+01:00 routine-update: New upstream version - - - - - 7c6a01cd by Andreas Tille at 2022-01-02T18:16:26+01:00 New upstream version 0.0.63-hotfix+ds - - - - - de2c1ffa by Andreas Tille at 2022-01-02T18:16:26+01:00 Update upstream source from tag 'upstream/0.0.63-hotfix+ds' Update to upstream version '0.0.63-hotfix+ds' with Debian dir 0facbe0537228537b9efd8b861a37b590ba6446c - - - - - 2f2ab8d9 by Andreas Tille at 2022-01-02T18:18:15+01:00 Upstream has applied patch - - - - - 9a78f4f0 by Andreas Tille at 2022-01-02T18:21:30+01:00 Upload to unstable - - - - - 6 changed files: - + .travis.yml - debian/changelog - debian/control - − debian/patches/fix-FTBFS.patch - − debian/patches/series - ncls/src/ncls.pyx Changes: ===================================== .travis.yml ===================================== @@ -0,0 +1,9 @@ +language: python +python: + - "3.6" +install: + - pip install cython pytest + - python setup.py install + +# functionality is tested in the pyranges package +script: py.test tests/test_ncls.py && cd ~/ && python -c 'import ncls; print(ncls.__version__)' ===================================== debian/changelog ===================================== @@ -1,3 +1,11 @@ +python-ncls (0.0.63-hotfix+ds-1) unstable; urgency=medium + + * Team upload. + * Move package to Debian Python Team + * Upstream has applied patch + + -- Andreas Tille <[email protected]> Sun, 02 Jan 2022 18:18:24 +0100 + python-ncls (0.0.63+ds-1) unstable; urgency=medium * New upstream version 0.0.63+ds ===================================== debian/control ===================================== @@ -1,5 +1,5 @@ Source: python-ncls -Maintainer: Debian Med Packaging Team <[email protected]> +Maintainer: Debian Python Team <[email protected]> Uploaders: Steffen Moeller <[email protected]>, Nilesh Patra <[email protected]> Section: science @@ -13,8 +13,8 @@ Build-Depends: debhelper-compat (= 13), python3-numpy <!nocheck>, python3-pytest <!nocheck> Standards-Version: 4.6.0 -Vcs-Browser: https://salsa.debian.org/med-team/python-ncls -Vcs-Git: https://salsa.debian.org/med-team/python-ncls.git +Vcs-Browser: https://salsa.debian.org/python-team/packages/python-ncls +Vcs-Git: https://salsa.debian.org/python-team/packages/python-ncls.git Homepage: https://github.com/biocore-ntnu/ncls Rules-Requires-Root: no ===================================== debian/patches/fix-FTBFS.patch deleted ===================================== @@ -1,24 +0,0 @@ -From e813f99031ca37310ac91d16a1d3a64b517601d1 Mon Sep 17 00:00:00 2001 -From: endre bakken stovner <[email protected]> -Date: Tue, 2 Nov 2021 17:56:00 +0100 -Subject: [PATCH] hotfix - ---- - ncls/src/ncls.pyx | 4 ++-- - 1 file changed, 2 insertions(+), 2 deletions(-) - -diff --git a/ncls/src/ncls.pyx b/ncls/src/ncls.pyx -index 4c0233e..ba7d0d6 100644 ---- a/ncls/src/ncls.pyx -+++ b/ncls/src/ncls.pyx -@@ -446,8 +446,8 @@ cdef class NCLS64: - @cython.boundscheck(False) - @cython.wraparound(False) - @cython.initializedcheck(False) -- cpdef set_difference_helper(self, const int64_t [::1] starts, const int64_t [::1] ends, const int64_t [::1] indexes, const int64_t [::1] nhits, -- const int64_t[::1] nhits): -+ cpdef set_difference_helper(self, const int64_t [::1] starts, const int64_t [::1] ends, const int64_t [::1] indexes, -+ const int64_t [::1] nhits): - - cdef int i - cdef int nhit = 0 ===================================== debian/patches/series deleted ===================================== @@ -1 +0,0 @@ -fix-FTBFS.patch ===================================== ncls/src/ncls.pyx ===================================== @@ -446,8 +446,8 @@ cdef class NCLS64: @cython.boundscheck(False) @cython.wraparound(False) @cython.initializedcheck(False) - cpdef set_difference_helper(self, const int64_t [::1] starts, const int64_t [::1] ends, const int64_t [::1] indexes, const int64_t [::1] nhits, - const int64_t[::1] nhits): + cpdef set_difference_helper(self, const int64_t [::1] starts, const int64_t [::1] ends, const int64_t [::1] indexes, + const int64_t [::1] nhits): cdef int i cdef int nhit = 0 View it on GitLab: https://salsa.debian.org/python-team/packages/python-ncls/-/compare/62c46f32c0f27cb7f57c41e0d6a3e097d2da429d...9a78f4f047963a0282bf144f7eb91a2cdab5a6ff -- View it on GitLab: https://salsa.debian.org/python-team/packages/python-ncls/-/compare/62c46f32c0f27cb7f57c41e0d6a3e097d2da429d...9a78f4f047963a0282bf144f7eb91a2cdab5a6ff You're receiving this email because of your account on salsa.debian.org.
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