Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
399968cf by Andreas Tille at 2022-01-04T13:42:26+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,23 +1,23 @@
-Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
+Last-Update: Tue, 04 Jan 2022 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 172 | {imaging,covid-19}
|
- orthanc | 104 | {covid-19,imaging,practice}
|
- orthanc-wsi | 53 |
{oncology,laboratory,practice,his,covid-19,imaging} |
- htsjdk | 31 | {bio-dev}
|
+ dcmtk | 176 | {imaging,covid-19}
|
+ orthanc | 107 | {covid-19,imaging,practice}
|
+ orthanc-wsi | 54 |
{oncology,laboratory,practice,his,covid-19,imaging} |
+ htsjdk | 30 | {bio-dev}
|
dicom3tools | 26 | {imaging}
|
- amide | 24 | {imaging}
|
- dcm2niix | 22 | {imaging}
|
+ amide | 23 | {imaging}
|
dicomscope | 22 | {imaging}
|
+ dcm2niix | 21 | {imaging}
|
orthanc-webviewer | 17 | {imaging}
|
gdcm | 15 | {covid-19,imaging}
|
gnumed-server | 15 | {covid-19,practice}
|
- ngs-sdk | 15 | {bio-dev}
|
minc-tools | 14 | {imaging}
|
+ ngs-sdk | 14 | {bio-dev}
|
adun.app | 13 | {bio}
|
- insighttoolkit4 | 13 | {imaging-dev}
|
pixelmed | 13 | {imaging}
|
+ insighttoolkit4 | 12 | {imaging-dev}
|
openslide | 12 | {imaging}
|
dicomnifti | 11 | {imaging}
|
invesalius | 11 | {imaging}
|
@@ -25,11 +25,11 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
libminc | 9 | {imaging-dev}
|
nifticlib | 9 | {imaging}
|
jebl2 | 8 | {bio-dev}
|
- king | 8 | {typesetting,imaging}
|
mia | 8 | {imaging}
|
nifticlib | 8 | {imaging-dev}
|
plastimatch | 8 | {imaging}
|
biojava-live | 7 | {bio-dev}
|
+ king | 7 | {typesetting,imaging}
|
mrtrix3 | 7 | {imaging}
|
ngs-sdk | 7 | {bio-dev}
|
lagan | 6 | {bio}
|
@@ -42,19 +42,21 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
salmon | 6 | {covid-19,bio}
|
beast-mcmc | 5 | {bio-phylogeny,bio}
|
libdivsufsort | 5 | {bio-dev}
|
+ obitools | 5 | {bio}
|
bio-tradis | 4 | {bio-dev,bio}
|
bitseq | 4 | {bio}
|
brig | 4 | {bio}
|
embassy-domainatrix | 4 | {bio,cloud}
|
embassy-domalign | 4 | {cloud,bio}
|
nifti2dicom | 4 | {imaging}
|
- obitools | 4 | {bio}
|
oscar | 4 | {data,tools,practice}
|
tracetuner | 4 | {bio}
|
anfo | 3 | {bio,cloud}
|
arden | 3 | {cloud,bio}
|
assemblytics | 3 | {bio}
|
+ atropos | 3 | {bio}
|
bart-view | 3 | {imaging}
|
+ biomaj3-cli | 3 | {cloud}
|
canu | 3 | {bio}
|
cat-bat | 3 | {bio,covid-19}
|
clonalorigin | 3 | {bio}
|
@@ -81,8 +83,6 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
treeview | 3 | {bio,bio-phylogeny}
|
tvc | 3 | {bio}
|
zalign | 3 | {bio,cloud}
|
- atropos | 2 | {bio}
|
- biomaj3-cli | 2 | {cloud}
|
blimps | 2 | {bio}
|
clonalframeml | 2 | {covid-19,bio}
|
delly | 2 | {bio,covid-19}
|
@@ -96,12 +96,14 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
lamarc | 2 | {bio}
|
libpal-java | 2 | {bio-dev}
|
mauve-aligner | 2 | {bio}
|
+ microbegps | 2 | {bio}
|
orthanc-gdcm | 2 | {imaging}
|
orthanc-mysql | 2 | {imaging}
|
papyrus | 2 | {imaging-dev}
|
phyutility | 2 | {bio,cloud}
|
pique | 2 | {bio}
|
placnet | 2 | {bio}
|
+ plasmidid | 2 | {covid-19,bio}
|
plasmidseeker | 2 | {bio}
|
pplacer | 2 | {covid-19,bio,bio-phylogeny}
|
proalign | 2 | {bio-phylogeny,bio}
|
@@ -130,12 +132,11 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
emboss-explorer | 1 | {bio}
|
getdata | 1 | {bio}
|
libbio-mage-utils-perl | 1 | {bio-dev}
|
+ libchado-perl | 1 | {bio-dev}
|
libctapimkt | 1 | {practice}
|
libsbml | 1 | {bio-dev}
|
libvistaio | 1 | {imaging-dev}
|
metaphlan2 | 1 | {bio}
|
- microbegps | 1 | {bio}
|
- plasmidid | 1 | {covid-19,bio}
|
python-wdlparse | 1 | {bio-dev}
|
shovill | 1 | {covid-19,bio}
|
varscan | 1 | {bio,covid-19}
|
@@ -162,7 +163,6 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
libbpp-raa | 0 | {bio-dev}
|
libbpp-seq | 0 | {bio-dev}
|
libbpp-seq-omics | 0 | {bio-dev}
|
- libchado-perl | 0 | {bio-dev}
|
libgenome | 0 | {bio-dev}
|
libgkarrays | 0 | {bio-dev}
|
libhmsbeagle | 0 | {bio-dev}
|
@@ -196,6 +196,7 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
resfinder-db | 0 | {bio}
|
sbmltoolbox | 0 | {bio-dev}
|
seq-gen | 0 | {bio}
|
+ sight | 0 | {imaging-dev}
|
simpleitk | 0 | {imaging-dev}
|
smrtanalysis | 0 | {bio,covid-19}
|
srf | 0 | {bio-dev}
|
@@ -203,7 +204,6 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
xdffileio | 0 | {imaging-dev}
|
xxsds-dynamic | 0 | {bio-dev}
|
mssstest | -1 | {tools}
|
- sight | -1 | {imaging-dev}
|
tipp | -1 | {bio,covid-19}
|
(233 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/399968cf3c75590dd5abb5995ccb3f0032a71e7c
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/399968cf3c75590dd5abb5995ccb3f0032a71e7c
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