Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
0497e3c5 by Andreas Tille at 2022-01-15T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,87 +1,87 @@
-Last-Update: Sat, 15 Jan 2022 01:42:04 +0000
+Last-Update: Sat, 15 Jan 2022 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 183 | {covid-19,imaging}
|
- orthanc | 104 | {imaging,covid-19,practice}
|
- orthanc-wsi | 52 |
{covid-19,his,imaging,practice,laboratory,oncology} |
+ dcmtk | 177 | {covid-19,imaging}
|
+ orthanc | 102 | {imaging,covid-19,practice}
|
+ orthanc-wsi | 53 |
{covid-19,his,imaging,practice,laboratory,oncology} |
+ amide | 30 | {imaging}
|
dicom3tools | 30 | {imaging}
|
- amide | 27 | {imaging}
|
- dicomscope | 25 | {imaging}
|
- htsjdk | 23 | {bio-dev}
|
+ dicomscope | 27 | {imaging}
|
+ htsjdk | 21 | {bio-dev}
|
dcm2niix | 18 | {imaging}
|
orthanc-webviewer | 17 | {imaging}
|
gnumed-server | 15 | {covid-19,practice}
|
gdcm | 14 | {imaging,covid-19}
|
minc-tools | 12 | {imaging}
|
- ngs-sdk | 12 | {bio-dev}
|
adun.app | 11 | {bio}
|
invesalius | 11 | {imaging}
|
- libminc | 11 | {imaging-dev}
|
gdcm | 10 | {imaging-dev}
|
+ libminc | 10 | {imaging-dev}
|
+ mia | 10 | {imaging}
|
+ ngs-sdk | 10 | {bio-dev}
|
nifticlib | 10 | {imaging-dev}
|
openslide | 10 | {imaging}
|
dicomnifti | 9 | {imaging}
|
- mia | 9 | {imaging}
|
ngs-sdk | 9 | {bio-dev}
|
orthanc-dicomweb | 9 | {covid-19,imaging}
|
pixelmed | 9 | {imaging}
|
nifti2dicom | 8 | {imaging}
|
nifticlib | 8 | {imaging}
|
- openslide | 8 | {imaging-dev}
|
orthanc-postgresql | 8 | {imaging}
|
+ lagan | 7 | {bio}
|
mrtrix3 | 7 | {imaging}
|
+ openslide | 7 | {imaging-dev}
|
plastimatch | 7 | {imaging}
|
- biojava-live | 6 | {bio-dev}
|
- lagan | 6 | {bio}
|
nifti2dicom | 6 | {imaging}
|
bart-view | 5 | {imaging}
|
+ biojava-live | 5 | {bio-dev}
|
king | 5 | {imaging,typesetting}
|
libdivsufsort | 5 | {bio-dev}
|
- librg-utils-perl | 5 | {bio}
|
- nipype | 5 | {imaging,imaging-dev}
|
obitools | 5 | {bio}
|
dicompyler | 4 | {oncology}
|
elastix | 4 | {imaging}
|
libncl | 4 | {bio}
|
- ngs-sdk | 4 | {bio-dev}
|
+ librg-utils-perl | 4 | {bio}
|
+ nipype | 4 | {imaging,imaging-dev}
|
orthanc-mysql | 4 | {imaging}
|
pymia | 4 | {imaging-dev}
|
salmon | 4 | {bio,covid-19}
|
+ treeview | 4 | {bio-phylogeny,bio}
|
arden | 3 | {bio,cloud}
|
- bio-tradis | 3 | {bio-dev,bio}
|
+ clonalorigin | 3 | {bio}
|
embassy-domalign | 3 | {bio,cloud}
|
+ getdata | 3 | {bio}
|
ghmm | 3 | {bio}
|
+ jebl2 | 3 | {bio-dev}
|
melting | 3 | {cloud,bio}
|
+ ngs-sdk | 3 | {bio-dev}
|
orthanc-gdcm | 3 | {imaging}
|
orthanc-python | 3 | {covid-19}
|
oscar | 3 | {data,practice,tools}
|
+ pscan-chip | 3 | {bio}
|
+ saint | 3 | {bio}
|
+ spread-phy | 3 | {bio,bio-phylogeny}
|
staden | 3 | {bio}
|
thesias | 3 | {bio,covid-19}
|
tracetuner | 3 | {bio}
|
- treeview | 3 | {bio-phylogeny,bio}
|
anfo | 2 | {cloud,bio}
|
assemblytics | 2 | {bio}
|
beast-mcmc | 2 | {bio-phylogeny,bio}
|
+ bio-tradis | 2 | {bio-dev,bio}
|
bitseq | 2 | {bio}
|
brig | 2 | {bio}
|
cat-bat | 2 | {bio,covid-19}
|
- clonalorigin | 2 | {bio}
|
embassy-domainatrix | 2 | {bio,cloud}
|
fastml | 2 | {bio}
|
- getdata | 2 | {bio}
|
- jebl2 | 2 | {bio-dev}
|
jellyfish1 | 2 | {bio}
|
lamarc | 2 | {bio}
|
- libbio-mage-utils-perl | 2 | {bio-dev}
|
papyrus | 2 | {imaging-dev}
|
+ phyutility | 2 | {cloud,bio}
|
pigx-rnaseq | 2 | {covid-19,bio}
|
piler | 2 | {bio}
|
- pscan-chip | 2 | {bio}
|
runcircos-gui | 2 | {bio}
|
- saint | 2 | {bio}
|
sibsim4 | 2 | {cloud,bio}
|
- spread-phy | 2 | {bio,bio-phylogeny}
|
stacks | 2 | {bio}
|
tvc | 2 | {bio}
|
zalign | 2 | {bio,cloud}
|
@@ -101,6 +101,7 @@ Last-Update: Sat, 15 Jan 2022 01:42:04 +0000
ipig | 1 | {bio}
|
jmodeltest | 1 | {bio-phylogeny,bio}
|
kmerresistance | 1 | {bio}
|
+ libbio-mage-utils-perl | 1 | {bio-dev}
|
libctapimkt | 1 | {practice}
|
libpal-java | 1 | {bio-dev}
|
librdp-taxonomy-tree-java | 1 | {bio-dev}
|
@@ -109,7 +110,6 @@ Last-Update: Sat, 15 Jan 2022 01:42:04 +0000
mauve-aligner | 1 | {bio}
|
metaphlan2 | 1 | {bio}
|
mhap | 1 | {bio,bio-ngs}
|
- phyutility | 1 | {cloud,bio}
|
pique | 1 | {bio}
|
placnet | 1 | {bio}
|
plasmidseeker | 1 | {bio}
|
@@ -190,8 +190,8 @@ Last-Update: Sat, 15 Jan 2022 01:42:04 +0000
pbcopper | 0 | {bio-dev}
|
pbseqlib | 0 | {bio-dev}
|
plasmidid | 0 | {covid-19,bio}
|
- python-seqcluster | 0 | {bio}
|
python-seqcluster | 0 | {covid-19,bio-dev}
|
+ python-seqcluster | 0 | {bio}
|
resfinder-db | 0 | {bio}
|
sbmltoolbox | 0 | {bio-dev}
|
seq-gen | 0 | {bio}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0497e3c5140712c8890f8c3b6179c4fa65e4fd43
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0497e3c5140712c8890f8c3b6179c4fa65e4fd43
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