Michael R. Crusoe pushed to branch master at Debian Med / toil
Commits:
f71b3dc9 by Michael R. Crusoe at 2022-01-24T16:56:55+01:00
Autopkgtests: sync skipped tests
- - - - -
3 changed files:
- debian/changelog
- debian/rules
- debian/tests/run-unit-tests
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+toil (5.6.0-2) unstable; urgency=medium
+
+ * {Autopkg,}tests: sync the skiped tests
+
+ -- Michael R. Crusoe <[email protected]> Mon, 24 Jan 2022 11:42:07 +0100
+
toil (5.6.0-1) unstable; urgency=medium
* New upstream version
=====================================
debian/rules
=====================================
@@ -23,7 +23,7 @@ override_dh_auto_install:
override_dh_auto_test:
ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
PYBUILD_SYSTEM=custom \
- PYBUILD_TEST_ARGS='HOME={home_dir} {interpreter} setup.py
develop --user && PYTHONPATH={dir}/src:$$PYTHONPATH
PATH={home_dir}/.local/bin/:$$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True
{interpreter} -m pytest -vv -W ignore --ignore src/toil/test/lib/aws/test_s3.py
--ignore src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore
src/toil/test/wdl/toilwdlTest.py --ignore src/toil/test/cwl/cwlTest.py --ignore
src/toil/test/src/promisedRequirementTest.py --ignore
src/toil/test/lib/test_ec2.py --ignore
src/toil/test/batchSystems/batchSystemTest.py -k "not (test_bioconda or
test_run_conformance or testImportFtpFile or ToilWdlIntegrationTest or SortTest
or testCwlexample or testVirtualEnv)" {dir}/src/toil/test' \
+ PYBUILD_TEST_ARGS='HOME={home_dir} {interpreter} setup.py
develop --user && PYTHONPATH={dir}/src:$$PYTHONPATH
PATH={home_dir}/.local/bin/:$$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True
{interpreter} -m pytest -vv -W ignore --ignore src/toil/test/lib/aws/test_s3.py
--ignore src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore
src/toil/test/wdl/toilwdlTest.py --ignore src/toil/test/cwl/cwlTest.py --ignore
src/toil/test/src/promisedRequirementTest.py --ignore
src/toil/test/lib/test_ec2.py --ignore
src/toil/test/batchSystems/batchSystemTest.py -k "not (test_bioconda or
test_run_conformance or testImportFtpFile or ToilWdlIntegrationTest or SortTest
or testCwlexample or testVirtualEnv or ToilDocumentationTest)"
{dir}/src/toil/test' \
dh_auto_test
endif
=====================================
debian/tests/run-unit-tests
=====================================
@@ -10,7 +10,8 @@ TMPDIR=${HOME}/tmp TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True
python3 -m pytest
awsjobstoretest or testCwlexample or CWLv10Test or CWLv11Test or \
CWLv12Test or AWSAutoscaleTest or AWSStaticAutoscaleTest or \
AWSManagedAutoscaleTest or AWSAutoscaleTestMultipleNodeTypes or \
- AWSRestartTest or PreemptableDeficitCompensationTest)" \
+ AWSRestartTest or PreemptableDeficitCompensationTest or
ToilDocumentationTest \
+ or testBuiltIn or testVirtualEnv)" \
--ignore-glob '*cwlTest*' --ignore
/usr/lib/python3/dist-packages/toil/test/lib/aws/test_s3.py \
--pyargs toil.test
View it on GitLab:
https://salsa.debian.org/med-team/toil/-/commit/f71b3dc9ceb995b2bf0dbb454724b88985456550
--
View it on GitLab:
https://salsa.debian.org/med-team/toil/-/commit/f71b3dc9ceb995b2bf0dbb454724b88985456550
You're receiving this email because of your account on salsa.debian.org.
_______________________________________________
debian-med-commit mailing list
[email protected]
https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
