Pierre Gruet pushed to branch upstream at Debian Med / igv
Commits: b70aabd9 by Pierre Gruet at 2022-02-09T15:51:37+01:00 New upstream version 2.12.0+dfsg - - - - - 30 changed files: - .gitignore - build.gradle - scripts/test_suite.args - src/main/java/module-info.java - src/main/java/org/broad/igv/Globals.java - src/main/java/org/broad/igv/batch/BatchRunner.java - src/main/java/org/broad/igv/batch/CommandExecutor.java - src/main/java/org/broad/igv/batch/CommandListener.java - src/main/java/org/broad/igv/bbfile/BBFileReader.java - src/main/java/org/broad/igv/bbfile/BBZoomLevels.java - src/main/java/org/broad/igv/bbfile/RPTree.java - src/main/java/org/broad/igv/bedpe/BedPEFeature.java - src/main/java/org/broad/igv/bedpe/BedPEParser.java - src/main/java/org/broad/igv/bedpe/InteractionTrack.java - src/main/java/org/broad/igv/bigwig/BigWigDataSource.java - src/main/java/org/broad/igv/data/CombinedDataSource.java - src/main/java/org/broad/igv/data/GenomeSummaryData.java - src/main/java/org/broad/igv/data/IGVDatasetParser.java - src/main/java/org/broad/igv/data/expression/ExpressionFileParser.java - src/main/java/org/broad/igv/data/expression/GeneToLocusHelper.java - src/main/java/org/broad/igv/data/seg/SegmentFileParser.java - src/main/java/org/broad/igv/feature/AbstractCacher.java - src/main/java/org/broad/igv/feature/Mutation.java - src/main/java/org/broad/igv/feature/genome/ChromosomeComparator.java - src/main/java/org/broad/igv/feature/genome/Genome.java - src/main/java/org/broad/igv/feature/genome/GenomeManager.java - src/main/java/org/broad/igv/feature/genome/fasta/FastaIndex.java - src/main/java/org/broad/igv/feature/genome/fasta/FastaIndexedSequence.java - src/main/java/org/broad/igv/feature/genome/load/ChromSizesParser.java - src/main/java/org/broad/igv/feature/genome/load/DotGenomeLoader.java The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/igv/-/commit/b70aabd9dc785c499ce5185ee6598571edbaaa65 -- View it on GitLab: https://salsa.debian.org/med-team/igv/-/commit/b70aabd9dc785c499ce5185ee6598571edbaaa65 You're receiving this email because of your account on salsa.debian.org.
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