Pierre Gruet pushed to branch master at Debian Med / drop-seq
Commits: 7eda9a00 by Pierre Gruet at 2022-02-22T21:15:44+01:00 Depending on libbiojava5-java instead of libbiojava4-java - - - - - 6ee384c5 by Pierre Gruet at 2022-02-22T22:19:15+01:00 Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/control - debian/drop-seq-tools.manifest - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,10 @@ +drop-seq (2.5.1+dfsg-2) unstable; urgency=medium + + * Team upload + * Depending on libbiojava5-java instead of libbiojava4-java + + -- Pierre Gruet <[email protected]> Tue, 22 Feb 2022 21:15:50 +0100 + drop-seq (2.5.1+dfsg-1) unstable; urgency=medium * New upstream version ===================================== debian/control ===================================== @@ -6,7 +6,7 @@ Uploaders: Andreas Tille <[email protected]> Build-Depends: debhelper-compat (= 13), javahelper, default-jdk-headless, - libbiojava4.0-java, + libbiojava5-java, libhtsjdk-java, libpicard-java, libcommons-collections4-java, @@ -31,7 +31,7 @@ Depends: ${java:Depends}, default-jre | java-runtime, java-wrappers, picard-tools, - libbiojava4.0-java, + libbiojava5-java, libpicard-java, libcommons-collections4-java, libcommons-lang-java, ===================================== debian/drop-seq-tools.manifest ===================================== @@ -1,3 +1,3 @@ usr/share/java/dropseq.jar: Main-Class: org.broadinstitute.dropseqrna.cmdline.DropSeqMain - Class-Path: /usr/share/java/guava.jar /usr/share/java/gson.jar /usr/share/java/htsjdk.jar /usr/share/java/picard.jar /usr/share/java/commons-collections4.jar /usr/share/java/commons-io.jar /usr/share/java/commons-lang.jar /usr/share/java/commons-math3.jar /usr/share/java/barclay.jar /usr/share/java/la4j.jar /usr/share/java/snakeyaml.jar /usr/share/java/biojava4-alignment.jar /usr/share/java/biojava4-core.jar + Class-Path: /usr/share/java/guava.jar /usr/share/java/gson.jar /usr/share/java/htsjdk.jar /usr/share/java/picard.jar /usr/share/java/commons-collections4.jar /usr/share/java/commons-io.jar /usr/share/java/commons-lang.jar /usr/share/java/commons-math3.jar /usr/share/java/barclay.jar /usr/share/java/la4j.jar /usr/share/java/snakeyaml.jar /usr/share/java/biojava5-alignment.jar /usr/share/java/biojava5-core.jar ===================================== debian/rules ===================================== @@ -17,8 +17,8 @@ override_dh_auto_configure: dh_auto_configure mkdir -p lib/test ln -s /usr/share/java/commons-collections4.jar lib/commons-collections4.jar - ln -s /usr/share/java/biojava4-alignment.jar lib/biojava4-alignment.jar - ln -s /usr/share/java/biojava4-core.jar lib/biojava4-core.jar + ln -s /usr/share/java/biojava5-alignment.jar lib/biojava5-alignment.jar + ln -s /usr/share/java/biojava5-core.jar lib/biojava5-core.jar ln -s /usr/share/java/commons-io.jar lib/commons-io.jar ln -s /usr/share/java/commons-lang.jar lib/commons-lang.jar ln -s /usr/share/java/commons-math3.jar lib/commons-math3.jar View it on GitLab: https://salsa.debian.org/med-team/drop-seq/-/compare/6516ceee3eef7626d9eb59981a9ffc04dd8fe2a7...6ee384c53153d64f6960d5c0fd4cd9a5f23c381f -- View it on GitLab: https://salsa.debian.org/med-team/drop-seq/-/compare/6516ceee3eef7626d9eb59981a9ffc04dd8fe2a7...6ee384c53153d64f6960d5c0fd4cd9a5f23c381f You're receiving this email because of your account on salsa.debian.org.
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