Nilesh Patra pushed to branch master at Debian Med / blasr
Commits: 8adb244c by Nilesh Patra at 2022-03-10T00:22:44+05:30 Versioned Depends on libpbseq - - - - - 5fd2d850 by Nilesh Patra at 2022-03-10T00:32:53+05:30 Update override - - - - - a426fc07 by Nilesh Patra at 2022-03-10T00:32:53+05:30 Add source lintian overrides for false positives - - - - - ab08f164 by Nilesh Patra at 2022-03-10T00:32:53+05:30 Update Uploader's copyright year - - - - - a516ef9d by Nilesh Patra at 2022-03-10T00:33:15+05:30 Upload to unstable - - - - - 5 changed files: - debian/changelog - debian/control - debian/copyright - debian/lintian-overrides - + debian/source/lintian-overrides Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,13 @@ +blasr (5.3.5+dfsg-4) unstable; urgency=medium + + * Team Upload. + * Versioned Depends on libpbseq to fix debci + * Update d/lintian-overrides + * Add source lintian overrides for false positives + * Update Uploader's copyright year + + -- Nilesh Patra <[email protected]> Thu, 10 Mar 2022 00:33:01 +0530 + blasr (5.3.5+dfsg-3) unstable; urgency=medium * d/rules: Drop -std=c++14 from DEB_CXXFLAGS_MAINT_APPEND ===================================== debian/control ===================================== @@ -16,7 +16,7 @@ Build-Depends: debhelper-compat (= 13), libpbdata-dev, libpbcopper-dev, libgtest-dev, - libblasr-dev (>= 5.3.4+dfsg-3~) + libblasr-dev (>= 5.3.4+dfsg-4~) Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/blasr Vcs-Git: https://salsa.debian.org/med-team/blasr.git @@ -27,7 +27,7 @@ Package: blasr Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, - libpbseq + libpbseq (>= 5.3.5+dfsg-4~) Description: mapping single-molecule sequencing reads Basic local alignment with successive refinement (BLASR) is a method for mapping single-molecule sequencing reads against a reference genome. ===================================== debian/copyright ===================================== @@ -11,7 +11,7 @@ Copyright: 2011-2016 Pacific Biosciences of California, Inc. License: PacBio-BSD-3-Clause Files: debian/* -Copyright: 2015-2016 Afif Elghraoui <[email protected]> +Copyright: 2015-2022 Afif Elghraoui <[email protected]> License: PacBio-BSD-3-Clause Files: debian/tests/data/* ===================================== debian/lintian-overrides ===================================== @@ -1,2 +1,4 @@ # False positive - CPPFLAGS are passed -hardening-no-fortify-functions usr/bin/blasr +hardening-no-fortify-functions [usr/bin/blasr] +hardening-no-bindnow [usr/bin/sawriter] +hardening-no-bindnow [usr/bin/blasr] ===================================== debian/source/lintian-overrides ===================================== @@ -0,0 +1,3 @@ +# False Positives +source: very-long-line-length-in-source-file README.md * +source: very-long-line-length-in-source-file ctest/pgc-fasta.t * View it on GitLab: https://salsa.debian.org/med-team/blasr/-/compare/2017b5228c902566c1b2f6ea051bc5d76eaadb72...a516ef9d7c22f7f26b520f1ce199b3a187a40083 -- View it on GitLab: https://salsa.debian.org/med-team/blasr/-/compare/2017b5228c902566c1b2f6ea051bc5d76eaadb72...a516ef9d7c22f7f26b520f1ce199b3a187a40083 You're receiving this email because of your account on salsa.debian.org.
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