Pierre Gruet pushed to branch master at Debian Med / picard-tools
Commits: f088eabf by Pierre Gruet at 2022-04-23T20:55:19+02:00 New upstream version 2.27.1+dfsg - - - - - 3241a630 by Pierre Gruet at 2022-04-23T20:56:27+02:00 Update upstream source from tag 'upstream/2.27.1+dfsg' Update to upstream version '2.27.1+dfsg' with Debian dir 6f574defdf7d76fa10c9fd8f2482d7b31377b1d4 - - - - - 0b37ed0e by Pierre Gruet at 2022-04-23T21:02:35+02:00 Refreshing patches - - - - - b2db714a by Pierre Gruet at 2022-04-23T21:03:40+02:00 Use secure URI in Homepage field. Changes-By: lintian-brush Fixes: lintian: homepage-field-uses-insecure-uri See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html - - - - - bf26678e by Pierre Gruet at 2022-04-23T21:08:27+02:00 Refreshing d/copyright - - - - - 64fb2c95 by Pierre Gruet at 2022-04-24T08:08:25+02:00 Upload to unstable - - - - - 30 changed files: - build.gradle - debian/changelog - debian/control - debian/copyright - debian/patches/10-build.xml.patch - debian/patches/20-shadowjar.patch - debian/patches/30-tests-fix-dataprovider.patch - debian/patches/40-tests-fix-testng.patch - debian/patches/correct_dataprovider_TestDontMergeAbuttingData.patch - debian/patches/remove_google_nio.patch - src/main/java/picard/analysis/AlignmentSummaryMetrics.java - src/main/java/picard/analysis/BaseDistributionByCycleMetrics.java - src/main/java/picard/analysis/CollectOxoGMetrics.java - src/main/java/picard/analysis/CollectQualityYieldMetrics.java - src/main/java/picard/analysis/CollectRawWgsMetrics.java - src/main/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.java - src/main/java/picard/analysis/FingerprintingDetailMetrics.java - src/main/java/picard/analysis/FingerprintingSummaryMetrics.java - src/main/java/picard/analysis/GcBiasDetailMetrics.java - src/main/java/picard/analysis/GcBiasSummaryMetrics.java - src/main/java/picard/analysis/InsertSizeMetrics.java - src/main/java/picard/analysis/JumpingLibraryMetrics.java - src/main/java/picard/analysis/RnaSeqMetrics.java - src/main/java/picard/analysis/RrbsCpgDetailMetrics.java - src/main/java/picard/analysis/RrbsMetrics.java - src/main/java/picard/analysis/RrbsSummaryMetrics.java - src/main/java/picard/analysis/TheoreticalSensitivityMetrics.java - src/main/java/picard/analysis/WgsMetrics.java - src/main/java/picard/analysis/artifacts/ErrorSummaryMetrics.java - src/main/java/picard/analysis/artifacts/SequencingArtifactMetrics.java The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/compare/7968c7574f7597095f3ab4c7c19ce5e782ad9597...64fb2c95b3feacd0511871c31484986f006739c4 -- View it on GitLab: https://salsa.debian.org/med-team/picard-tools/-/compare/7968c7574f7597095f3ab4c7c19ce5e782ad9597...64fb2c95b3feacd0511871c31484986f006739c4 You're receiving this email because of your account on salsa.debian.org.
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