Pierre Gruet pushed to branch master at Debian Med / igv
Commits: 85e56923 by Pierre Gruet at 2022-05-31T20:51:37+02:00 New upstream version 2.13.0+dfsg - - - - - f193987c by Pierre Gruet at 2022-05-31T20:53:24+02:00 Update upstream source from tag 'upstream/2.13.0+dfsg' Update to upstream version '2.13.0+dfsg' with Debian dir 6060db99270fd9424c1f526fb548362ad6df77f5 - - - - - 84847375 by Pierre Gruet at 2022-05-31T20:57:05+02:00 Refreshing patches - - - - - 302fe105 by Pierre Gruet at 2022-05-31T21:03:19+02:00 Setting Standards version to 4.6.1 (no change) - - - - - 4c814059 by Pierre Gruet at 2022-05-31T22:03:36+02:00 Removing more AWS stuff - - - - - 0e616eb7 by Pierre Gruet at 2022-05-31T22:04:00+02:00 Omit the instantiation of URLDecoder - - - - - b0c6afc7 by Pierre Gruet at 2022-05-31T22:05:21+02:00 Updating changelog - - - - - 5d4fc600 by Pierre Gruet at 2022-05-31T22:08:58+02:00 Forwarding patch - - - - - 17e214b8 by Pierre Gruet at 2022-05-31T23:05:16+02:00 Upload to unstable - - - - - 30 changed files: - README.md - debian/changelog - debian/control - + debian/patches/no_instantiation_of_URLDecoder.patch - debian/patches/omit_aws_stuff.patch - debian/patches/series - src/main/java/org/broad/igv/aws/S3LoadDialog.java - src/main/java/org/broad/igv/batch/CommandExecutor.java - src/main/java/org/broad/igv/bigwig/BigWigDataSource.java → src/main/java/org/broad/igv/bbfile/BBDataSource.java - + src/main/java/org/broad/igv/bbfile/BBUtils.java - + src/main/java/org/broad/igv/bbfile/codecs/BBBedCodec.java - + src/main/java/org/broad/igv/bbfile/codecs/BBCodec.java - + src/main/java/org/broad/igv/bbfile/codecs/BBCodecFactory.java - + src/main/java/org/broad/igv/bbfile/codecs/BBGenePredCodec.java - + src/main/java/org/broad/igv/bbfile/codecs/BBNarowPeakCodec.java - src/main/java/org/broad/igv/blast/BlastMapping.java - src/main/java/org/broad/igv/feature/AbstractFeature.java - src/main/java/org/broad/igv/feature/BasicFeature.java - src/main/java/org/broad/igv/feature/Exon.java - src/main/java/org/broad/igv/feature/FeatureUtils.java - src/main/java/org/broad/igv/feature/IGVFeature.java - src/main/java/org/broad/igv/feature/Mutation.java - src/main/java/org/broad/igv/feature/SpliceJunctionFeature.java - src/main/java/org/broad/igv/feature/UCSCSnpFeature.java - src/main/java/org/broad/igv/feature/bionano/SMAPFeature.java - src/main/java/org/broad/igv/feature/bionano/SMAPPairedFeature.java - src/main/java/org/broad/igv/feature/dranger/DRangerFeature.java - src/main/java/org/broad/igv/feature/genome/GenomeBuilderDialog.java - src/main/java/org/broad/igv/feature/genome/load/JsonGenomeLoader.java - src/main/java/org/broad/igv/feature/tribble/PAFFeature.java The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/igv/-/compare/177bb6cb1bb4056aa8fdf70050261a1b247eeef6...17e214b8b362d462e5a00ccf6ea9ee43e12dcc20 -- View it on GitLab: https://salsa.debian.org/med-team/igv/-/compare/177bb6cb1bb4056aa8fdf70050261a1b247eeef6...17e214b8b362d462e5a00ccf6ea9ee43e12dcc20 You're receiving this email because of your account on salsa.debian.org.
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