Étienne Mollier pushed to branch master at Debian Med / parsnp
Commits: 15f94c37 by Étienne Mollier at 2022-07-09T21:09:59+02:00 d/control: add dependency to python3-pyabpoa. - - - - - 3fc5e10f by Étienne Mollier at 2022-07-09T21:11:19+02:00 update changelog, with note to wait for abpoa. - - - - - 2 changed files: - debian/changelog - debian/control Changes: ===================================== debian/changelog ===================================== @@ -1,21 +1,14 @@ parsnp (1.7.3+dfsg-1) UNRELEASED; urgency=medium -TODO: upload missing pyabpoa, otherwise new parsnp version fails to run with: -Test 1: With GenBank Annotations -Traceback (most recent call last): - File "/usr/bin/parsnp", line 20, in <module> - import parsnp.extend as ext - File "/usr/lib/python3/dist-packages/parsnp/extend.py", line 18, in <module> - import pyabpoa as pa -ModuleNotFoundError: No module named 'pyabpoa' -Missing dependency seems to be: https://github.com/yangao07/abPOA +TODO: wait for abpoa to pass through NEW. * d/control: add myself to uploaders. * New upstream version * Standards-Version: 4.6.1 (routine-update) * Delete typos.patch: applied upstream. * Refresh proper_calls_to_tools.patch and py3-parsnp-libs.patch. + * d/control: add dependency to python3-pyabpoa. - -- Étienne Mollier <[email protected]> Thu, 07 Jul 2022 22:24:45 +0200 + -- Étienne Mollier <[email protected]> Sat, 09 Jul 2022 21:10:31 +0200 parsnp (1.7.2+dfsg-1) unstable; urgency=medium ===================================== debian/control ===================================== @@ -7,6 +7,7 @@ Priority: optional Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, + python3-pyabpoa, python3-setuptools, cython3, libmuscle-dev @@ -23,6 +24,7 @@ Depends: ${shlibs:Depends}, ${python3:Depends}, python3-biopython, python3-numpy, + python3-pyabpoa, fasttree, harvest-tools, mummer, View it on GitLab: https://salsa.debian.org/med-team/parsnp/-/compare/81b421918ee73c4178e9fbe503c69293f10e8bfe...3fc5e10fe70df8b2eff8ac33253e3f479a738f93 -- View it on GitLab: https://salsa.debian.org/med-team/parsnp/-/compare/81b421918ee73c4178e9fbe503c69293f10e8bfe...3fc5e10fe70df8b2eff8ac33253e3f479a738f93 You're receiving this email because of your account on salsa.debian.org.
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