Sascha Steinbiss pushed to branch master at Debian Med / fastaq
Commits: 16b03e86 by Sascha Steinbiss at 2022-10-08T15:49:05+02:00 actually fix watchfile - - - - - 1d3cd3d5 by Sascha Steinbiss at 2022-10-08T15:49:20+02:00 bump Standards-Version - - - - - 2cac0959 by Sascha Steinbiss at 2022-10-08T15:50:00+02:00 move to pytest - - - - - 004855f2 by Sascha Steinbiss at 2022-10-08T15:50:08+02:00 bump copyright date - - - - - 7 changed files: - debian/changelog - debian/control - debian/copyright - + debian/patches/series - + debian/patches/tests - debian/rules - debian/watch Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,12 @@ +fastaq (3.17.0-5) unstable; urgency=medium + + * Actually fix watchfile. + * Bump Standards-Version. + * Enable tests and move to pytest. + Closes: #1018351 + + -- Sascha Steinbiss <[email protected]> Sat, 08 Oct 2022 15:29:32 +0200 + fastaq (3.17.0-4) unstable; urgency=medium [ Steffen Moeller ] ===================================== debian/control ===================================== @@ -10,10 +10,10 @@ Build-Depends: debhelper-compat (= 13), python3, python3-setuptools, python3-pkg-resources, - python3-nose, + python3-pytest, samtools, help2man -Standards-Version: 4.6.0 +Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/fastaq Vcs-Git: https://salsa.debian.org/med-team/fastaq.git Homepage: https://github.com/sanger-pathogens/Fastaq ===================================== debian/copyright ===================================== @@ -8,7 +8,7 @@ License: GPL-3 Files: debian/* Copyright: © 2014 Jorge Soares <[email protected]> - © 2015-2020 Sascha Steinbiss <[email protected]> + © 2015-2022 Sascha Steinbiss <[email protected]> License: GPL-3 License: GPL-3 ===================================== debian/patches/series ===================================== @@ -0,0 +1 @@ +tests ===================================== debian/patches/tests ===================================== @@ -0,0 +1,15 @@ +Description: Switch away from nose +Author: Sascha Steinbiss <[email protected]> +Last-Update: 2022-10-08 +--- a/setup.py ++++ b/setup.py +@@ -11,8 +11,7 @@ + author_email='[email protected]', + url='https://github.com/sanger-pathogens/Fastaq', + scripts=glob.glob('scripts/*'), +- test_suite='nose.collector', +- tests_require=['nose >= 1.3'], ++ test_suite='tests', + license='GPLv3', + classifiers=[ + 'Development Status :: 4 - Beta', ===================================== debian/rules ===================================== @@ -2,6 +2,7 @@ export DH_VERBOSE := 1 export PYBUILD_NAME=fastaq +export PYBUILD_TEST_PYTEST = 1 mandir := $(CURDIR)/debian/man debfolder := $(CURDIR)/debian @@ -29,3 +30,7 @@ override_dh_installman: sed -i 's/.SH DESCRIPTION/.SH DESCRIPTION\\n.nf/' debian/man/fastaq.1 scripts/fastaq 2>&1 | tail -n +13 | debian/make_man dh_installman -- + +override_dh_auto_test: + PYBUILD_SYSTEM=custom \ + PYBUILD_TEST_ARGS="cd {dir}; {interpreter} -m pytest pyfastaq/tests/" dh_auto_test ===================================== debian/watch ===================================== @@ -1,2 +1,2 @@ version=4 -https://github.com/sanger-pathogens/fastaq/releases .*/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz) +https://github.com/sanger-pathogens/fastaq/tags .*/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz) View it on GitLab: https://salsa.debian.org/med-team/fastaq/-/compare/0d2c56d67c3e6dcffbb4b3853e40bd45e67d8ea8...004855f2fcd676a1b8f46ffda98e1ab305174e07 -- View it on GitLab: https://salsa.debian.org/med-team/fastaq/-/compare/0d2c56d67c3e6dcffbb4b3853e40bd45e67d8ea8...004855f2fcd676a1b8f46ffda98e1ab305174e07 You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
