Sascha Steinbiss pushed to branch upstream at Debian Med / rna-star


Commits:
89e51161 by Sascha Steinbiss at 2022-12-27T02:18:28+01:00
New upstream version 2.7.10b+dfsg
- - - - -


30 changed files:

- + .travis.yml
- CHANGES.md
- README.md
- RELEASEnotes.md
- doc/STARmanual.pdf
- docs/STARsolo.md
- extras/doc-latex/STARmanual.tex
- extras/docker/Dockerfile
- extras/scripts/sjFromSAMcollapseUandM.awk
- extras/scripts/sjFromSAMcollapseUandM_inclOverlaps.awk
- source/Genome.cpp
- source/Makefile
- source/OutSJ.cpp
- source/OutSJ.h
- source/ParametersClip_initialize.cpp
- source/ParametersSolo.cpp
- source/ParametersSolo.h
- source/ReadAlignChunk_mapChunk.cpp
- source/STAR.cpp
- source/SharedMemory.cpp
- source/Solo.cpp
- source/SoloCommon.h
- source/SoloFeature.cpp
- source/SoloFeature.h
- source/SoloFeature_cellFiltering.cpp
- source/SoloFeature_collapseUMIall_multiMappers.cpp → 
source/SoloFeature_collapseUMIall.cpp
- source/SoloFeature_countCBgeneUMI.cpp
- source/SoloFeature_countVelocyto.cpp
- source/SoloFeature_outputResults.cpp
- source/SoloFeature_processRecords.cpp


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/rna-star/-/commit/89e511619950f991efd95a5a581ee65a840673d3

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