Andreas Tille pushed to branch master at Debian Med / libncl
Commits: 143cd2fe by Andreas Tille at 2023-01-14T15:59:26+01:00 Fix Python3.11 issues - - - - - 16074de0 by Andreas Tille at 2023-01-14T15:59:53+01:00 routine-update: Standards-Version: 4.6.2 - - - - - bf7957d0 by Andreas Tille at 2023-01-14T16:02:29+01:00 routine-update: Ready to upload to unstable - - - - - 4 changed files: - debian/changelog - debian/control - + debian/patches/python3.11.patch - debian/patches/series Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,11 @@ +libncl (2.1.21+git20210811.b1213a7-4) unstable; urgency=medium + + * Fix Python3.11 issues + Closes: #1028677 + * Standards-Version: 4.6.2 (routine-update) + + -- Andreas Tille <[email protected]> Sat, 14 Jan 2023 16:00:10 +0100 + libncl (2.1.21+git20210811.b1213a7-3) unstable; urgency=medium * Team upload. ===================================== debian/control ===================================== @@ -6,7 +6,7 @@ Priority: optional Build-Depends: debhelper-compat (= 13), d-shlibs, python3 -Standards-Version: 4.6.1 +Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/libncl Vcs-Git: https://salsa.debian.org/med-team/libncl.git Homepage: https://github.com/mtholder/ncl ===================================== debian/patches/python3.11.patch ===================================== @@ -0,0 +1,37 @@ +Description: Fix Python3.11 issues +Bug-Debian: https://bugs.debian.org/1028677 +Author: Andreas Tille <[email protected]> +Last-Update: Sat, 14 Jan 2023 15:57:39 +0100 + +--- a/test/roundTripNCLTest.py ++++ b/test/roundTripNCLTest.py +@@ -103,8 +103,8 @@ def runTest(inArgPath, + if copyOutput and pRep == 0: + shutil.copy2(tf, expectedOut) + elif compareOut: +- e = open(expectedOut, "rU") +- o = open(tf, "rU") ++ e = open(expectedOut, "r") ++ o = open(tf, "r") + eit = iter(e) + oit = iter(o) + n = 1 +@@ -211,7 +211,7 @@ if options.auto: + sys.exit(m) + print((m + " Test stepped skipped.")) + sys.exit(0) +- resourceFileStream = open(resourceFilePath, "rU") ++ resourceFileStream = open(resourceFilePath, "r") + else: + if len(args) != 3: + if not options.invalid: +--- a/misc/generate_codon_recode.py ++++ b/misc/generate_codon_recode.py +@@ -1,6 +1,6 @@ + #!/usr/bin/python3 + import sys +-f = open(sys.argv[1], "rU") ++f = open(sys.argv[1], "r") + bases = "ACGT" + aaInd = "ACDEFGHIKLMNPQRSTVWY" + def getCodonStr(n): ===================================== debian/patches/series ===================================== @@ -2,3 +2,4 @@ fix_rpath_issue.patch set_soname_version.patch spelling.patch 2to3.patch +python3.11.patch View it on GitLab: https://salsa.debian.org/med-team/libncl/-/compare/e96496628f22c175f8b6aac0ec23abe7b3891c6b...bf7957d04bed30176818048d79206a8dcdab5d07 -- View it on GitLab: https://salsa.debian.org/med-team/libncl/-/compare/e96496628f22c175f8b6aac0ec23abe7b3891c6b...bf7957d04bed30176818048d79206a8dcdab5d07 You're receiving this email because of your account on salsa.debian.org.
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