Author: christophgil-guest Date: 2012-05-28 14:47:44 +0000 (Mon, 28 May 2012) New Revision: 11034
Added: trunk/packages/strap/trunk/debian/changelog trunk/packages/strap/trunk/debian/compat trunk/packages/strap/trunk/debian/control trunk/packages/strap/trunk/debian/control~ trunk/packages/strap/trunk/debian/debhelper.log trunk/packages/strap/trunk/debian/menu trunk/packages/strap/trunk/debian/postinst.debhelper trunk/packages/strap/trunk/debian/postrm.debhelper trunk/packages/strap/trunk/debian/strap.debhelper.log trunk/packages/strap/trunk/debian/substvars Log: Added: trunk/packages/strap/trunk/debian/changelog =================================================================== --- trunk/packages/strap/trunk/debian/changelog (rev 0) +++ trunk/packages/strap/trunk/debian/changelog 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1,6 @@ +strap (1-1) UNRELEASED; urgency=low + + * Initial release (Closes: #xxxxxxxxx) + + -- Christoph Gille <[email protected]> Thu, 17 Nov 2011 18:30:16 +0100 + Added: trunk/packages/strap/trunk/debian/compat =================================================================== --- trunk/packages/strap/trunk/debian/compat (rev 0) +++ trunk/packages/strap/trunk/debian/compat 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1 @@ +8 Added: trunk/packages/strap/trunk/debian/control =================================================================== --- trunk/packages/strap/trunk/debian/control (rev 0) +++ trunk/packages/strap/trunk/debian/control 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1,32 @@ +Source: strap +Section: science +Priority: extra +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Christoph Gille <[email protected]> +Build-Depends: libstrap-java +Standards-Version: 3.9.2 +Homepage: http://3d-alignment.eu/ +Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/strap/trunk/ +Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/strap/trunk/ + +Package: strap +Architecture: all +Depends: libstrap-java, ${misc:Depends}, gwrite, catdoc, clustalw, tm-align, pymol, texlive-latex-base, mustang +Recommends: +Suggests: +Enhances: clustalw, tm-align, pymol, mustang +Description: Compute and edit Sequence and structure alignments of proteins. + Strap is a work-bench for proteins. It can compute multiple sequence + alignments and structure alignments and it is used structure/function + prediction and database searching. Modern standard tools can be used + in an intuitive graphical user interface which follows the paradigms + of modern user interfaces such as drag'n drop. The sequence + alignment view and the 3D-visualization (Pymol, Jmol or OpenAstex) + are tightly linked. Information can be attached to residue + selections such as free text notes as well as 3D and 1D display + styles. Figures can be created in publication quality. The alignment + can be exported in several formats: PDF, MS-Word, HTML, Jalview, + Multiple-Fasta, ClustalW, MSF, HSSP - see http://3d-alignment.eu/ for + details. Interactive alignments can be published in Web-pages. For + this purpose, HTML code is generated automatically. + \ No newline at end of file Added: trunk/packages/strap/trunk/debian/control~ =================================================================== --- trunk/packages/strap/trunk/debian/control~ (rev 0) +++ trunk/packages/strap/trunk/debian/control~ 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1,31 @@ +Source: strap +Section: science +Priority: extra +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Christoph Gille <[email protected]> +Build-Depends: libstrap-java +Standards-Version: 3.9.2 +Homepage: http://3d-alignment.eu/ +Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/strap/trunk/ +Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/strap/trunk/ + +Package: strap +Architecture: all +Depends: libstrap-java, ${misc:Depends}, gwrite, catdoc, clustalw, tm-align, neobio, pymol +Recommends: +Suggests: texlive-latex-base +Enhances: clustalw, tm-align +Description: Compute and edit Sequence and structure alignments of proteins. + Strap is a work-bench for proteins. It can compute multiple sequence + alignments and structure alignments and it is used structure/function + prediction and database searching. Modern standard tools can be used + in an intuitive graphical user interface which follows the paradigms + of modern user interfaces such as drag'n drop. The sequence + alignment view and the 3D-visualization (Pymol, Jmol or OpenAstex) + are tightly linked. Information can be attached to residue + selections such as free text notes as well as 3D and 1D display + styles. Figures can be created in publication quality. The alignment + can be exported in several formats: PDF, MS-Word, HTML, Jalview, + Multiple-Fasta, ClustalW, MSF, HSSP - see http://3d-alignment.eu/ for + details. Interactive alignments can be published in Web-pages. For + this purpose, HTML code is generated automatically. Added: trunk/packages/strap/trunk/debian/debhelper.log =================================================================== --- trunk/packages/strap/trunk/debian/debhelper.log (rev 0) +++ trunk/packages/strap/trunk/debian/debhelper.log 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1,45 @@ +dh_auto_configure +dh_auto_build +dh_auto_test +dh_prep +dh_installdirs +dh_auto_install +dh_install +dh_installdocs +dh_installchangelogs +dh_installexamples +dh_installman +dh_installcatalogs +dh_installcron +dh_installdebconf +dh_installemacsen +dh_installifupdown +dh_installinfo +dh_pysupport +dh_installinit +dh_installmenu +dh_installmime +dh_installmodules +dh_installlogcheck +dh_installlogrotate +dh_installpam +dh_installppp +dh_installudev +dh_installwm +dh_installxfonts +dh_bugfiles +dh_lintian +dh_gconf +dh_icons +dh_perl +dh_usrlocal +dh_link +dh_compress +dh_fixperms +dh_strip +dh_makeshlibs +dh_shlibdeps +dh_installdeb +dh_gencontrol +dh_md5sums +dh_builddeb Added: trunk/packages/strap/trunk/debian/menu =================================================================== --- trunk/packages/strap/trunk/debian/menu (rev 0) +++ trunk/packages/strap/trunk/debian/menu 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1,7 @@ +?package(strap):\ + needs="X11"\ + section="Applications/Science/Biology"\ + hints="Sequence alignment"\ + longtitle="Strap: User Interface for sequence and 3D protein alignments"\ + title="Strap"\ + command="/usr/bin/strap" Added: trunk/packages/strap/trunk/debian/postinst.debhelper =================================================================== --- trunk/packages/strap/trunk/debian/postinst.debhelper (rev 0) +++ trunk/packages/strap/trunk/debian/postinst.debhelper 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1,5 @@ +# Automatically added by dh_installmenu +if [ "$1" = "configure" ] && [ -x "`which update-menus 2>/dev/null`" ]; then + update-menus +fi +# End automatically added section Added: trunk/packages/strap/trunk/debian/postrm.debhelper =================================================================== --- trunk/packages/strap/trunk/debian/postrm.debhelper (rev 0) +++ trunk/packages/strap/trunk/debian/postrm.debhelper 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1,3 @@ +# Automatically added by dh_installmenu +if [ -x "`which update-menus 2>/dev/null`" ]; then update-menus ; fi +# End automatically added section Added: trunk/packages/strap/trunk/debian/strap.debhelper.log =================================================================== --- trunk/packages/strap/trunk/debian/strap.debhelper.log (rev 0) +++ trunk/packages/strap/trunk/debian/strap.debhelper.log 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1,3 @@ +dh_auto_configure +dh_auto_build +dh_auto_test Added: trunk/packages/strap/trunk/debian/substvars =================================================================== --- trunk/packages/strap/trunk/debian/substvars (rev 0) +++ trunk/packages/strap/trunk/debian/substvars 2012-05-28 14:47:44 UTC (rev 11034) @@ -0,0 +1 @@ +misc:Depends= _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
