Étienne Mollier pushed to branch master at Debian Med / bedtools
Commits: 50e76de3 by Étienne Mollier at 2023-06-23T22:12:45+02:00 routine-update: New upstream version - - - - - de42b012 by Étienne Mollier at 2023-06-23T22:12:47+02:00 New upstream version 2.31.0+dfsg - - - - - b045ade9 by Étienne Mollier at 2023-06-23T22:13:12+02:00 Update upstream source from tag 'upstream/2.31.0+dfsg' Update to upstream version '2.31.0+dfsg' with Debian dir a5f8b71ca488edf4146df385591d9f977eb0f379 - - - - - a7381107 by Étienne Mollier at 2023-06-23T22:13:12+02:00 routine-update: Standards-Version: 4.6.2 - - - - - 821afd62 by Étienne Mollier at 2023-06-23T22:14:07+02:00 remove_barski_binding_site.png.patch: unfuzz. - - - - - ca88564d by Étienne Mollier at 2023-06-23T22:17:52+02:00 2to3.patch: refresh. - - - - - 04322fad by Étienne Mollier at 2023-06-23T22:19:47+02:00 2to3.patch: declare forwarding not-needed. Upstream looks to assume python is python3 nowadays. - - - - - df5ad2bd by Étienne Mollier at 2023-06-23T22:20:50+02:00 hardening patch: unfuzz. - - - - - a7b07acb by Étienne Mollier at 2023-06-23T22:21:08+02:00 htsutil patch: unfuzz. - - - - - 0555677f by Étienne Mollier at 2023-06-23T22:24:46+02:00 gcc-13.patch: add; fix ftbfs with gcc-13. Closes: #1037588 Thanks: David Seifert - - - - - 9a4d3bff by Étienne Mollier at 2023-06-23T22:51:57+02:00 2to3.patch: remove my unneeded "fix". Gbp-Dch: ignore - - - - - 9411a762 by Étienne Mollier at 2023-06-23T22:52:22+02:00 d/control: bedtools-test depend on python3. - - - - - f9286654 by Étienne Mollier at 2023-06-23T22:56:20+02:00 2to3.patch: remove remaining occurrences of python. There are still some tests and some documentation referring to the unversionned python, which in Debian is by default python2. - - - - - ad36a93f by Étienne Mollier at 2023-06-23T23:18:39+02:00 ready to upload to unstable. - - - - - 30 changed files: - .gitignore - Makefile - README.md - debian/changelog - debian/control - debian/patches/2to3.patch - + debian/patches/gcc-13.patch - debian/patches/hardening - debian/patches/htsutil - debian/patches/remove_barski_binding_site.png.patch - debian/patches/series - docs/conf.py - docs/content/bedtools-suite.rst - docs/content/general-usage.rst - docs/content/history.rst - + docs/content/images/tool-glyphs/multiinter-glyph.png - + docs/content/images/tool-glyphs/summary.png - docs/content/installation.rst - docs/content/overview.rst - docs/content/tools/bamtobed.rst - docs/content/tools/bamtofastq.rst - docs/content/tools/closest.rst - docs/content/tools/genomecov.rst - docs/content/tools/groupby.rst - docs/content/tools/maskfasta.rst - docs/content/tools/multiinter.rst - docs/content/tools/overlap.rst - docs/content/tools/shift.rst - + docs/content/tools/summary.rst - docs/index.rst The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/bedtools/-/compare/4219183268d78af75628673989254cea91ef006b...ad36a93f547695e9e3fd55c94cfcbfe7b081b932 -- View it on GitLab: https://salsa.debian.org/med-team/bedtools/-/compare/4219183268d78af75628673989254cea91ef006b...ad36a93f547695e9e3fd55c94cfcbfe7b081b932 You're receiving this email because of your account on salsa.debian.org.
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