Author: christophgil-guest Date: 2012-05-31 00:01:57 +0000 (Thu, 31 May 2012) New Revision: 11117
Modified: trunk/packages/strap-base/trunk/debian/bin/strap-protein-alignment trunk/packages/strap-base/trunk/debian/changelog trunk/packages/strap-base/trunk/debian/control trunk/packages/strap-base/trunk/debian/copyright Log: Modified: trunk/packages/strap-base/trunk/debian/bin/strap-protein-alignment =================================================================== --- trunk/packages/strap-base/trunk/debian/bin/strap-protein-alignment 2012-05-30 23:25:38 UTC (rev 11116) +++ trunk/packages/strap-base/trunk/debian/bin/strap-protein-alignment 2012-05-31 00:01:57 UTC (rev 11117) @@ -24,7 +24,7 @@ echo which would set heap size to 500 Megabytes. echo -EXEC="$JAVA_HOME/bin/java $xmx -cp $CP charite.christo.strap.Strap -useDebian -warnInstall=debian $S3D -a3d=mustang -aligner2=kalign -probeWebProxy -stdout -askUpload $*" +EXEC="$JAVA_HOME/bin/java $xmx -cp $CP charite.christo.strap.Strap -useDebian -warnInstall=debian $S3D -a3d=mustang -aligner2=kalign -v3d=pymol -probeWebProxy -stdout -askUpload $*" echo echo $EXEC Modified: trunk/packages/strap-base/trunk/debian/changelog =================================================================== --- trunk/packages/strap-base/trunk/debian/changelog 2012-05-30 23:25:38 UTC (rev 11116) +++ trunk/packages/strap-base/trunk/debian/changelog 2012-05-31 00:01:57 UTC (rev 11117) @@ -1,6 +1,6 @@ strap-base (1-1) UNRELEASED; urgency=low - * Initial release (Closes: #xxxxxxxxx) + * Initial release (Closes: #675202) -- Christoph Gille <[email protected]> Thu, 17 Nov 2011 18:30:16 +0100 Modified: trunk/packages/strap-base/trunk/debian/control =================================================================== --- trunk/packages/strap-base/trunk/debian/control 2012-05-30 23:25:38 UTC (rev 11116) +++ trunk/packages/strap-base/trunk/debian/control 2012-05-31 00:01:57 UTC (rev 11117) @@ -8,16 +8,21 @@ Homepage: http://www.bioinformatics.org/strap/ Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/strap-base/trunk/ Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/strap-base/trunk/ - Package: strap-base Architecture: any Depends: openjdk-6-jre | sun-java6-jre, java-wrappers, ${misc:Depends}, libcommons-httpclient-java, libcommons-compress-java, libhttpmime-java, libjavatar-java,libhttpclient-java, libgeronimo-activation-1.1-spec-java Recommends: -Suggests: +Suggests: strap Enhances: -Description: Base for the bioinformatics tool Strap and related utilities - This package is required for Strap. - Strap is a work-bench for protein sequences and structures. +Description: Minimal environment for the bioinformatics tool Strap for + aligning proteins by sequence and/or structure. This package is + sufficient to run /usr/bin/strap-protein-alignment. But external + programs and libraries enhancing the functionality of Strap such as + 3D-visualization, automated 3D-superposition, 3D-alignment and + sequence alignment are missing. End users should therefore install + the debian package "strap" which links all required packages. Other + software using Strap as a viewer for proteins, alignments and + 3D-superpositions may not need the full spectrum of external + libraries and may therefore refer to "strap-base" to reduce the + number of loaded debian packages. - -# texlive-latex-extra \ No newline at end of file Modified: trunk/packages/strap-base/trunk/debian/copyright =================================================================== --- trunk/packages/strap-base/trunk/debian/copyright 2012-05-30 23:25:38 UTC (rev 11116) +++ trunk/packages/strap-base/trunk/debian/copyright 2012-05-31 00:01:57 UTC (rev 11117) @@ -1,6 +1,6 @@ Format: http://dep.debian.net/deps/dep5/ Upstream-Name: Strap -Upstream-Contact: Oliver Frings christoph_gi-at-googlemail-com +Upstream-Contact: Christoph Gille christoph_gi-at-googlemail-com Source: http://www.bioinformatics.org/strap/debian/strap-base_1.orig.tar.gz Comment: Some files were removed, see the get-orig-source target in ‘debian/rules’. _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
