Andreas Tille pushed to branch master at Debian Med / rna-star


Commits:
73dc9874 by Andreas Tille at 2023-08-21T19:27:42+02:00
Update changelog

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984666ab by Andreas Tille at 2023-08-21T19:32:29+02:00
New upstream version 2.7.11a+dfsg
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729cba44 by Andreas Tille at 2023-08-21T19:32:29+02:00
routine-update: New upstream version

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0e47566b by Andreas Tille at 2023-08-21T19:32:30+02:00
Update upstream source from tag 'upstream/2.7.11a+dfsg'

Update to upstream version '2.7.11a+dfsg'
with Debian dir a764c9789ea54540a3df7975ad979e4b12c0f87e
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1e8e3740 by Andreas Tille at 2023-08-21T19:45:56+02:00
Refresh patches

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916fa040 by Andreas Tille at 2023-08-21T19:55:37+02:00
routine-update: Ready to upload to unstable

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30 changed files:

- CHANGES.md
- README.md
- debian/changelog
- debian/patches/donotuse_own_htslib.patch
- doc/STARmanual.pdf
- extras/doc-latex/STARmanual.tex
- extras/doc-latex/parametersDefault.tex
- extras/docker/Dockerfile
- source/Genome_transformGenome.cpp
- source/IncludeDefine.h
- source/Makefile
- source/Parameters.cpp
- source/Parameters.h
- source/ParametersGenome.cpp
- source/ParametersGenome.h
- source/ParametersSolo.cpp
- source/ParametersSolo.h
- source/Parameters_samAttributes.cpp
- source/ReadAlign.cpp
- source/ReadAlign.h
- source/ReadAlign_alignBAM.cpp
- source/ReadAlign_multMapSelect.cpp
- source/ReadAlign_oneRead.cpp
- source/ReadAlign_outputAlignments.cpp
- source/ReadAlign_transformGenome.cpp
- source/ReadAlign_waspMap.cpp
- source/ReadAnnotations.h
- source/STAR.cpp
- source/SoloFeature_sumThreads.cpp
- source/SoloReadBarcode.h


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/rna-star/-/compare/f71be6ce16c1c95286fbe6e7075d404c8a5c8f29...916fa04036cca31804032446f7f2fc04d6486eeb

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View it on GitLab: 
https://salsa.debian.org/med-team/rna-star/-/compare/f71be6ce16c1c95286fbe6e7075d404c8a5c8f29...916fa04036cca31804032446f7f2fc04d6486eeb
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