Israel Komolehin pushed to branch master at Debian Med / pique
Commits: fe7a3237 by Komolehin Israel Timilehin at 2023-12-12T16:43:02+00:00 Added patch to fix smartpca command - - - - - 74b00c1c by Komolehin Israel Timilehin at 2023-12-12T16:44:40+00:00 Added autopkgtest - - - - - 91c94c60 by Komolehin Israel Timilehin at 2023-12-12T17:01:16+00:00 Close Bug - - - - - bb78acdb by Komolehin Israel Timilehin at 2023-12-12T17:05:34+00:00 Updated debian/tests/control - - - - - 6 changed files: - debian/changelog - + debian/patches/series - + debian/patches/smartpca_fix.diff - − debian/tests/_control_ - + debian/tests/control - − debian/tests/run-unit-test Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,10 @@ +pique (1.0-7) UNRELEASED; urgency=medium + + * Added patch to fix smartpca command + * Added autopkgtest (Closes: #986194) + + -- Komolehin Israel Timilehin <[email protected]> Tue, 12 Dec 2023 16:57:46 +0000 + pique (1.0-6) unstable; urgency=medium * Team upload. ===================================== debian/patches/series ===================================== @@ -0,0 +1 @@ +smartpca_fix.diff ===================================== debian/patches/smartpca_fix.diff ===================================== @@ -0,0 +1,11 @@ +--- a/bin/pique-input ++++ b/bin/pique-input +@@ -838,7 +838,7 @@ + must_close($par_fh); + + # run smartpca +- run("smartpca -p $par_file > $out-smartpca.log"); ++ run("/usr/lib/eigensoft/smartpca -p $par_file > $out-smartpca.log"); + + # tidy up + if ( !$opt_d ) { ===================================== debian/tests/_control_ deleted ===================================== @@ -1,3 +0,0 @@ -Tests: run-unit-test -Depends: @ -Restrictions: allow-stderr ===================================== debian/tests/control ===================================== @@ -0,0 +1,3 @@ +Test-command: cd test && make +Depends: pique, pique-doc, wget, r-cran-hmisc +Restrictions: allow-stderr, needs-internet ===================================== debian/tests/run-unit-test deleted ===================================== @@ -1,15 +0,0 @@ -#!/bin/bash -set -e - -pkg=pique - -if [ "${AUTOPKGTEST_TMP}" = "" ] ; then - AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) - trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM -fi - -cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}" - -cd "${AUTOPKGTEST_TMP}" - -make View it on GitLab: https://salsa.debian.org/med-team/pique/-/compare/d7cf8f68d7573bd2e9c6c1ae8dea3f26d1b32485...bb78acdbb21aaa147e24b47b32134b1575a8b0bd -- View it on GitLab: https://salsa.debian.org/med-team/pique/-/compare/d7cf8f68d7573bd2e9c6c1ae8dea3f26d1b32485...bb78acdbb21aaa147e24b47b32134b1575a8b0bd You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
