Author: christophgil-guest Date: 2012-06-09 08:53:51 +0000 (Sat, 09 Jun 2012) New Revision: 11293
Modified: trunk/packages/strap/trunk/debian/control trunk/packages/strap/trunk/debian/rules trunk/packages/strap/trunk/debian/strap.install Log: Description changed. Still problems copying the two files from the latex-extra package. Modified: trunk/packages/strap/trunk/debian/control =================================================================== --- trunk/packages/strap/trunk/debian/control 2012-06-09 08:22:48 UTC (rev 11292) +++ trunk/packages/strap/trunk/debian/control 2012-06-09 08:53:51 UTC (rev 11293) @@ -15,19 +15,19 @@ Recommends: muscle, mafft, t-coffee, probcons, dialign, dialign-t, amap-align Suggests: Enhances: clustalw, tm-align, pymol, mustang, muscle, mafft, t-coffee, probcons, dialign, dialign-t, amap-align -Description: Strap is a work-bench for proteins. It can be used to - display, edit and compute multiple sequence alignments, structure - alignments and 3D-structure superpositions. It aids structure / - function prediction and database searching. Modern standard tools - can be used in an intuitive graphical user interface which follows - the paradigms of modern user interfaces such as drag'n drop. The - sequence alignment view and the Pymol 3D-visualization are tightly - linked. Information can be attached to residue selections such as - free text notes as well as 3D and 1D display styles. Figures can be - created in publication quality. The alignment can be exported in - several formats: PDF, MS-Word, HTML, Jalview, Multiple-Fasta, - ClustalW, MSF, HSSP - see http://3d-alignment.eu/ for details. - Interactive alignments can be published in Web-pages. For this - purpose, HTML code is generated automatically. Strap is scriptable - and can be used by programs and web-services to display sequence - alignments and 3D-superpositions. +Description: Work-bench for comparing proteins by sequence and + structure. It can be used to display, edit and compute multiple + sequence alignments, structure alignments and 3D-structure + superpositions. It aids structure / function prediction and database + searching. Modern standard tools can be used in an intuitive + graphical user interface which follows the paradigms of modern user + interfaces such as drag'n drop. The sequence alignment view and the + Pymol 3D-visualization are tightly linked. Information can be + attached to residue selections such as free text notes as well as 3D + and 1D display styles. Figures can be created in publication + quality. The alignment can be exported in several formats: PDF, + MS-Word, HTML, Jalview, Multiple-Fasta, ClustalW, MSF, HSSP - see + http://3d-alignment.eu/ for details. Interactive alignments can be + published in Web-pages. For this purpose, HTML code is generated + automatically. Strap is scriptable and can be used by programs and + web-services to display sequence alignments and 3D-superpositions. Modified: trunk/packages/strap/trunk/debian/rules =================================================================== --- trunk/packages/strap/trunk/debian/rules 2012-06-09 08:22:48 UTC (rev 11292) +++ trunk/packages/strap/trunk/debian/rules 2012-06-09 08:53:51 UTC (rev 11293) @@ -3,15 +3,25 @@ # export DH_VERBOSE=1 VERSION := 1 +pkg:=strap %: dh $@ override_dh_auto_build: + dh_auto_build # Only two small sty files of the huge package texlive-latex-extra are required in Strap # Include these two files such that texlive-latex-extra can be ommitted - mkdir -p usr/lib/strap - cp /usr/share/texmf-texlive/tex/latex/texshade/texshade.sty usr/lib/strap - cp /usr/share/texmf-texlive/tex/latex/vmargin/vmargin.sty usr/lib/strap +# mkdir -p $(CURDIR)/debian/$(pkg)/usr/lib/strap + mkdir -p $(CURDIR)/debian/tmp/usr/lib/strap + cp /usr/share/texmf-texlive/tex/latex/texshade/texshade.sty $(CURDIR)/debian/tmp/usr/lib/strap + mkdir -p $(CURDIR)/debian/$(pkg)/usr/lib/strap + cp /usr/share/texmf-texlive/tex/latex/vmargin/vmargin.sty $(CURDIR)/debian/$(pkg)/usr/lib/strap + echo 111111111111 $(CURDIR)/debian/tmp/usr/lib/strap + ls -l $(CURDIR)/debian/tmp/usr/lib/strap + echo 222222222222 $(CURDIR)/debian/$(pkg)/usr/lib/strap + ls -l $(CURDIR)/debian/$(pkg)/usr/lib/strap + + Modified: trunk/packages/strap/trunk/debian/strap.install =================================================================== --- trunk/packages/strap/trunk/debian/strap.install 2012-06-09 08:22:48 UTC (rev 11292) +++ trunk/packages/strap/trunk/debian/strap.install 2012-06-09 08:53:51 UTC (rev 11293) @@ -3,4 +3,3 @@ debian/bin/strap_util_toClustal usr/bin - _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
