Étienne Mollier pushed to branch master at Debian Med / pyensembl
Commits: 6e1add79 by Étienne Mollier at 2024-02-28T20:54:05+01:00 d/t/run-unit-test: update test directory name. (Attempt to) fix autopkgtests needing Internet. - - - - - 88ea2c2e by Étienne Mollier at 2024-02-28T20:55:05+01:00 update changelog. - - - - - 2 changed files: - debian/changelog - debian/tests/run-unit-test Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,10 @@ +pyensembl (2.3.9-2) UNRELEASED; urgency=medium + + * d/t/run-unit-test: update test directory name. + Fix autopkgtests needing Internet. + + -- Étienne Mollier <[email protected]> Wed, 28 Feb 2024 20:54:52 +0100 + pyensembl (2.3.9-1) unstable; urgency=medium * New upstream version 2.3.9 ===================================== debian/tests/run-unit-test ===================================== @@ -7,38 +7,38 @@ if [ "$AUTOPKGTEST_TMP" = "" ] ; then trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM fi -cp -a test/ $AUTOPKGTEST_TMP +cp -a tests/ $AUTOPKGTEST_TMP cd $AUTOPKGTEST_TMP # common.py and data.py are missing from the source tarball in Pypi, but these # files are present in the Github source code. These files are required to run # the following tests: -rm test/test_download_cache.py -rm test/test_ensembl_gtf.py -rm test/test_gene_ids.py -rm test/test_gene_names.py -rm test/test_gene_objects.py -rm test/test_id_length.py -rm test/test_missing_genome_sources.py -rm test/test_mouse.py -rm test/test_search.py -rm test/test_sequence_data.py -rm test/test_serialization.py -rm test/test_transcript_ids.py -rm test/test_transcript_objects.py -rm test/test_ucsc_gtf.py +rm tests/test_download_cache.py +rm tests/test_ensembl_gtf.py +rm tests/test_gene_ids.py +rm tests/test_gene_names.py +rm tests/test_gene_objects.py +rm tests/test_id_length.py +rm tests/test_missing_genome_sources.py +rm tests/test_mouse.py +rm tests/test_search.py +rm tests/test_sequence_data.py +rm tests/test_serialization.py +rm tests/test_transcript_ids.py +rm tests/test_transcript_objects.py +rm tests/test_ucsc_gtf.py # pyensembl is missing a dependency needed to import test data. The test data # could be added to debian/tests/data or in a multi-source tarball depending # on the size of data being added. The following tests are affected: -rm test/test_contigs.py -rm test/test_exon_id.py -rm test/test_exon_object.py -rm test/test_string_representation.py -rm test/test_timings.py -rm test/test_transcript_sequences.py -rm test/test_transcript_support_level.py +rm tests/test_contigs.py +rm tests/test_exon_id.py +rm tests/test_exon_object.py +rm tests/test_string_representation.py +rm tests/test_timings.py +rm tests/test_transcript_sequences.py +rm tests/test_transcript_support_level.py for py in $(py3versions -s) do View it on GitLab: https://salsa.debian.org/med-team/pyensembl/-/compare/666bcc9903ee55ebaf42ac6ec72d7b3fc81482e5...88ea2c2e272e01c321ac49e316cf4e211fbf6cab -- View it on GitLab: https://salsa.debian.org/med-team/pyensembl/-/compare/666bcc9903ee55ebaf42ac6ec72d7b3fc81482e5...88ea2c2e272e01c321ac49e316cf4e211fbf6cab You're receiving this email because of your account on salsa.debian.org.
_______________________________________________ debian-med-commit mailing list [email protected] https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
